fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G19490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032295 not found in 310aa AT3G12480.1 1st_not 0.419431279 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G19490.1     MKKKLQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAK
pt032295_POPTR_ MKKKLDTRFPAVRIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
                *****:*****.**********:************************::**::**.****

AT5G19490.1     TVNAFHLKQCVQATNVFDFLRDTVAKVPDLGGSDT--EDQSATKRRKVVDGSSCN-DEDM
pt032295_POPTR_ TLNSLHLKQCVQTFNVFDFLREIVSKVPDLGGPDVTGDERAVAKRRKVADDEDNDSDEEC
                *:*::*******: *******: *:*******.*.  ::::.:*****.*... : **: 

AT5G19490.1     IKTTQMHEVKHTSCGRGR---RGRGRGRSSGRTGSGLSLKFEEDLEDGSPESSRTPSPEN
pt032295_POPTR_ SRNRTNETIQTSSSGRGRGRGRGRGRGRGRGR---------------GTRSMERETAAQH
                 :.   . :: :*.****   *******. **               *: . .* .:.::

AT5G19490.1     GSLSHDDTSWKKVASHNNHH-------------------SSNSEVKVRNFDLNVELDENG
pt032295_POPTR_ GKFEDD----PDIDHHNDKHCPKLDKDYEPKDSKDNIPAGRNLQAPVRDFDLNAGLDENG
                *.:..*     .:  **::*                   . * :. **:****. *****

AT5G19490.1     DNATWL-------------------------------------ETQLERSPDYPLE-INE
pt032295_POPTR_ ETQPVLASVPSSFSTKSDTGVPASSLTKPDTVVPASSSTKPTPELKHEEVPGWSLEDIEK
                :. . *                                     * : *. *.:.** *::

AT5G19490.1     MKIDPDDQQQASAS-----DEEDYDEESIDQE
pt032295_POPTR_ MDINP--VQLANLNTRIDEEEEDYDEEDCSY-
                *.*:*   * *. .     :*******. .
BoxShade v3.31 C (beta, 970507) Output
AT5G19490.1     M K K K L Q T R F P A T R I K K I M Q T D E E V G K I A M A V P L L V S K A L E L F L Q D L C N H T Y D V T L S R G A K
pt032295_POPTR_    M K K K L D T R F P A V R I K K I M Q T D E D V G K I A M A V P L L V S K A L E L F L Q D L C D R T Y E I T L K R G A K
 
AT5G19490.1     T V N A F H L K Q C V Q A T N V F D F L R D T V A K V P D L G G S D T - - E D Q S A T K R R K V V D G S S C N - D E D M
pt032295_POPTR_    T L N S L H L K Q C V Q T F N V F D F L R E I V S K V P D L G G P D V T G D E R A V A K R R K V A D D E D N D S D E E C
 
AT5G19490.1     I K T T Q M H E V K H T S C G R G R - - - R G R G R G R S S G R T G S G L S L K F E E D L E D G S P E S S R T P S P E N
pt032295_POPTR_    S R N R T N E T I Q T S S S G R G R G R G R G R G R G R G R G R - - - - - - - - - - - - - - - G T R S M E R E T A A Q H
 
AT5G19490.1     G S L S H D D T S W K K V A S H N N H H - - - - - - - - - - - - - - - - - - - S S N S E V K V R N F D L N V E L D E N G
pt032295_POPTR_    G K F E D D - - - - P D I D H H N D K H C P K L D K D Y E P K D S K D N I P A G R N L Q A P V R D F D L N A G L D E N G
 
AT5G19490.1     D N A T W L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E T Q L E R S P D Y P L E - I N E
pt032295_POPTR_    E T Q P V L A S V P S S F S T K S D T G V P A S S L T K P D T V V P A S S S T K P T P E L K H E E V P G W S L E D I E K
 
AT5G19490.1     M K I D P D D Q Q Q A S A S - - - - - D E E D Y D E E S I D Q E
pt032295_POPTR_    M D I N P - - V Q L A N L N T R I D E E E E D Y D E E D C S Y -
 
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