fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G19790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032612 not found in 287aa AT5G19790.1 1st_1st 0.395465994 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G19790.1     MEHQTTPKQ-------KTKEKSKGN--KTKFVGVRQRPSGKWVAEIKDTT--QKIRMWLG
pt032612_POPTR_ MEYHQFQKQPGGVSHSKFKERCSSNTSRNKFVGVRQRPSGKWVAEIKDTTQSQKIRMWLG
                **::   **       * **:...*  :.*********************  ********

AT5G19790.1     TFETAEEAARAYDEAACLLRGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQQQQH
pt032612_POPTR_ TFETAEEAARAYDEAACLLRGSNTRTNFNTHVPSNSPVSMKIRNLLKHKKSLKQN-----
                **************************** .*.*.** :*:******::*:*:**:     

AT5G19790.1     KPVSSLTDCNINYISTATSLTTTTTTTTT-------------TAIP--------------
pt032612_POPTR_ --------------SSATSTTKSTIKTSTIVSSKSSFNRSINSFLPNDSNIDSFSSSIDN
                              *:*** *.:* .*:*             : :*              

AT5G19790.1     --------------LNNVYRPDSS--VIGQPETEGLQLPYSWPLVSGFNHQIPLAQAG--
pt032612_POPTR_ HSSYFNGIKQENKVFDNAYRPDLSGCCIGGLEPVTSQSHPSCSLPSGFDPQLQFVQEGMW
                              ::*.**** *   **  *.   *   * .* ***: *: :.* *  

AT5G19790.1     -GETHGHLNDHYSTDQHLGLAE-----IERQISASLYAMNGANSYYDNMNAEYAIFDPTD
pt032612_POPTR_ LPKNAGLLSDTSSGPE---LAEFERMKVERQISASLYAMNGGNEYFENAN------DSSD
                  :. * *.*  *  :   ***     :*************.*.*::* *      *.:*

AT5G19790.1     PIWDLPSLSQLFCPT
pt032612_POPTR_ ALWDLPALCQLFCSS
                .:****:*.****.:
BoxShade v3.31 C (beta, 970507) Output
AT5G19790.1     M E H Q T T P K Q - - - - - - - K T K E K S K G N - - K T K F V G V R Q R P S G K W V A E I K D T T - - Q K I R M W L G
pt032612_POPTR_    M E Y H Q F Q K Q P G G V S H S K F K E R C S S N T S R N K F V G V R Q R P S G K W V A E I K D T T Q S Q K I R M W L G
 
AT5G19790.1     T F E T A E E A A R A Y D E A A C L L R G S N T R T N F A N H F P N N S Q L S L K I R N L L H Q K Q S M K Q Q Q Q Q Q H
pt032612_POPTR_    T F E T A E E A A R A Y D E A A C L L R G S N T R T N F N T H V P S N S P V S M K I R N L L K H K K S L K Q N - - - - -
 
AT5G19790.1     K P V S S L T D C N I N Y I S T A T S L T T T T T T T T T - - - - - - - - - - - - - T A I P - - - - - - - - - - - - - -
pt032612_POPTR_    - - - - - - - - - - - - - - S S A T S T T K S T I K T S T I V S S K S S F N R S I N S F L P N D S N I D S F S S S I D N
 
AT5G19790.1     - - - - - - - - - - - - - - L N N V Y R P D S S - - V I G Q P E T E G L Q L P Y S W P L V S G F N H Q I P L A Q A G - -
pt032612_POPTR_    H S S Y F N G I K Q E N K V F D N A Y R P D L S G C C I G G L E P V T S Q S H P S C S L P S G F D P Q L Q F V Q E G M W
 
AT5G19790.1     - G E T H G H L N D H Y S T D Q H L G L A E - - - - - I E R Q I S A S L Y A M N G A N S Y Y D N M N A E Y A I F D P T D
pt032612_POPTR_    L P K N A G L L S D T S S G P E - - - L A E F E R M K V E R Q I S A S L Y A M N G G N E Y F E N A N - - - - - - D S S D
 
AT5G19790.1     P I W D L P S L S Q L F C P T
pt032612_POPTR_    A L W D L P A L C Q L F C S S
 
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