fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G19790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004893 not found in 299aa AT5G19790.1 1st_1st 0.236775818 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G19790.1     ME-H-----QTTPKQK-------------TKEKSK-----------GNKTKFVGVRQRPS
Sb004893_Sorbi1 MELHFQQPPQSHPQQQYSSYQQPPATTKETKPRTRTKCGSGGGGGGGSGSKFVGVRQRPS
                ** *     *: *:*:             ** :::           *. :**********

AT5G19790.1     GKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF----ANHFPNNSQ
Sb004893_Sorbi1 GRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGANTRTNFAAAGAHASPPDSP
                *:**************************************:******    *:  * :* 

AT5G19790.1     LSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYI------------STATSLTTTTT
Sb004893_Sorbi1 LAARIRGILNHKR-MKKNASQQH---------TVNFFPAGAYHRAAGAAATAASTTSTST
                *: :**.:*::*: **:: .***         .:*::            :**:* *:*:*

AT5G19790.1     TTTTTAIPLNNVYRPDSSVIG-QPETEGLQLP------------YSWPLVSGFNHQIPLA
Sb004893_Sorbi1 ITTTTS-SVSPSSSPSSSIVSFAMSSHGVRTPILPAAQSIAEEAYRPYLVSGGGEEFQLA
                 ****: .:.    *.**::.   .:.*:: *            *   **** ..:: **

AT5G19790.1     QAGGETHGHLN----------DHYSTDQHLGLAE-----IERQISASLYAMNGANSYYDN
Sb004893_Sorbi1 TRQYEQQWALNNTSIPPSDGCDMANENACLVVAEADKVKLEKKSSAS---HHGGMDRVQD
                    * :  **          *  . :  * :**     :*:: ***    :*. .  ::

AT5G19790.1     MNAEYAIFDPTDPIWDLPSLSQLFCPT
Sb004893_Sorbi1 KDVFEAGNDASDS--------------
                 :.  *  *.:*.
BoxShade v3.31 C (beta, 970507) Output
AT5G19790.1     M E - H - - - - - Q T T P K Q K - - - - - - - - - - - - - T K E K S K - - - - - - - - - - - G N K T K F V G V R Q R P S
Sb004893_Sorbi1    M E L H F Q Q P P Q S H P Q Q Q Y S S Y Q Q P P A T T K E T K P R T R T K C G S G G G G G G G S G S K F V G V R Q R P S
 
AT5G19790.1     G K W V A E I K D T T Q K I R M W L G T F E T A E E A A R A Y D E A A C L L R G S N T R T N F - - - - A N H F P N N S Q
Sb004893_Sorbi1    G R W V A E I K D T T Q K I R M W L G T F E T A E E A A R A Y D E A A C L L R G A N T R T N F A A A G A H A S P P D S P
 
AT5G19790.1     L S L K I R N L L H Q K Q S M K Q Q Q Q Q Q H K P V S S L T D C N I N Y I - - - - - - - - - - - - S T A T S L T T T T T
Sb004893_Sorbi1    L A A R I R G I L N H K R - M K K N A S Q Q H - - - - - - - - - T V N F F P A G A Y H R A A G A A A T A A S T T S T S T
 
AT5G19790.1     T T T T T A I P L N N V Y R P D S S V I G - Q P E T E G L Q L P - - - - - - - - - - - - Y S W P L V S G F N H Q I P L A
Sb004893_Sorbi1    I T T T T S - S V S P S S S P S S S I V S F A M S S H G V R T P I L P A A Q S I A E E A Y R P Y L V S G G G E E F Q L A
 
AT5G19790.1     Q A G G E T H G H L N - - - - - - - - - - D H Y S T D Q H L G L A E - - - - - I E R Q I S A S L Y A M N G A N S Y Y D N
Sb004893_Sorbi1    T R Q Y E Q Q W A L N N T S I P P S D G C D M A N E N A C L V V A E A D K V K L E K K S S A S - - - H H G G M D R V Q D
 
AT5G19790.1     M N A E Y A I F D P T D P I W D L P S L S Q L F C P T
Sb004893_Sorbi1    K D V F E A G N D A S D S - - - - - - - - - - - - - -
 
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