fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G19790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043818 not found in 273aa AT5G19790.1 1st_1st 0.322418136 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G19790.1     MEH--QTTPKQKTKEKSKGNKT-KFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEA
gm043818_Glyma1 MGRGIAITKGGKLKGRSRSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEA
                * :    *   * * :*:.*:* ***********:*************************

AT5G19790.1     ARAYDEAACLLRGSNTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQQQ----QQQHKPVS
gm043818_Glyma1 ARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGVKKQEDTNANANNAPAP
                ******************** .*.. :* *: :*****::::.:*:*:    : :: *..

AT5G19790.1     SLTDCNINYISTATSLTTTTTTT------------------TTTAIPLNNVYRPDSSVIG
gm043818_Glyma1 KVTTTRSASTCTSTSTSTSTSTSSNSSNGNDKNDKSLSTANTRSSNLFDDAYKPDLSNCR
                .:*  .    .*:** :*:*:*:                  * ::  :::.*:** *   

AT5G19790.1     QPETEGLQLPYSWPLVSGFNHQIPLAQAGGETHGHLNDHYSTD-QHLGLAE-----IERQ
gm043818_Glyma1 EEFESGHQSNASWGFGTVFD-RFPIAQILDIP--KIDDGLLTNAADLELSEFERMKVERQ
                :   .* *   ** : : *: ::*:**  . .  :::*   *:  .* *:*     :***

AT5G19790.1     ISASLYAMNGANSYYDNMNAEYAIFDPTDPIWDLPSLSQLFCPT
gm043818_Glyma1 ISASLYAINGVQEYMETVQ------DSNDTLWDLPPLCSMFC--
                *******:**.:.* :.::      *..*.:****.*..:**
BoxShade v3.31 C (beta, 970507) Output
AT5G19790.1     M E H - - Q T T P K Q K T K E K S K G N K T - K F V G V R Q R P S G K W V A E I K D T T Q K I R M W L G T F E T A E E A
gm043818_Glyma1    M G R G I A I T K G G K L K G R S R S N N T N K F V G V R Q R P S G R W V A E I K D T T Q K I R M W L G T F E T A E E A
 
AT5G19790.1     A R A Y D E A A C L L R G S N T R T N F A N H F P N N S Q L S L K I R N L L H Q K Q S M K Q Q Q - - - - Q Q Q H K P V S
gm043818_Glyma1    A R A Y D E A A C L L R G S N T R T N F I T H V S L D S P L A S R I R N L L N N R K G V K K Q E D T N A N A N N A P A P
 
AT5G19790.1     S L T D C N I N Y I S T A T S L T T T T T T T - - - - - - - - - - - - - - - - - - T T T A I P L N N V Y R P D S S V I G
gm043818_Glyma1    K V T T T R S A S T C T S T S T S T S T S T S S N S S N G N D K N D K S L S T A N T R S S N L F D D A Y K P D L S N C R
 
AT5G19790.1     Q P E T E G L Q L P Y S W P L V S G F N H Q I P L A Q A G G E T H G H L N D H Y S T D - Q H L G L A E - - - - - I E R Q
gm043818_Glyma1    E E F E S G H Q S N A S W G F G T V F D - R F P I A Q I L D I P - - K I D D G L L T N A A D L E L S E F E R M K V E R Q
 
AT5G19790.1     I S A S L Y A M N G A N S Y Y D N M N A E Y A I F D P T D P I W D L P S L S Q L F C P T
gm043818_Glyma1    I S A S L Y A I N G V Q E Y M E T V Q - - - - - - D S N D T L W D L P P L C S M F C - -
 
0