fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G22380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021927 not found in 227aa AT3G44350.2 not_not 0.506578947 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G22380.1     MADEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRC
pt021927_POPTR_ -MEELPLGYRFYPTEEELVSFYLHNKLEG-TRQELQRVIPEISIYDIEPGDLPQLSGELC
                  :*:.:*:**************:*:*** : :.::**** :.::::**..**:::*  *

AT5G22380.1     RGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTG
pt021927_POPTR_ RGNTEQWFFFTPRQAREARGGRPNRTTATGYWKATGSPGYVYSSDNRVIGLKKTMVFYIG
                **::******.*** ********.***.:********** *:*.**::** ******* *

AT5G22380.1     KAPTGRKTKWKMNEYHAV---DETVNASTIPKLRREFSLCRVYITTGSSRAFDRRPEGVL
pt021927_POPTR_ KAPTGRKTKWKMNEYRAIEVHESSRNATS--KLRHEFSLCRVYVVSGSFRAFDRRP----
                ***************:*:   :.: **::  ***:********:.:** *******    

AT5G22380.1     QTERMLTSDVAVAETSFRVESSLETSISGGEHID-----VSMNTEFVDGLSEPMWDW---
pt021927_POPTR_ -----LEADPITVEMT----SSPETSYSGGDHVDYPGTAASAN-------------WGLI
                     * :*  ..* :    ** *** ***:*:*     .* *             *   

AT5G22380.1     ----EQLTW--P-----
pt021927_POPTR_ LHGNDRNNWIGPAQIDL
                    :: .*  *
BoxShade v3.31 C (beta, 970507) Output
AT5G22380.1     M A D E V T I G F R F Y P T E E E L V S F Y L R N Q L E G R S D D S M H R V I P V L D V F E V E P S H L P N V A G V R C
pt021927_POPTR_    - M E E L P L G Y R F Y P T E E E L V S F Y L H N K L E G - T R Q E L Q R V I P E I S I Y D I E P G D L P Q L S G E L C
 
AT5G22380.1     R G D A E Q W F F F V P R Q E R E A R G G R P S R T T G S G Y W K A T G S P G P V F S K D N K M I G A K K T M V F Y T G
pt021927_POPTR_    R G N T E Q W F F F T P R Q A R E A R G G R P N R T T A T G Y W K A T G S P G Y V Y S S D N R V I G L K K T M V F Y I G
 
AT5G22380.1     K A P T G R K T K W K M N E Y H A V - - - D E T V N A S T I P K L R R E F S L C R V Y I T T G S S R A F D R R P E G V L
pt021927_POPTR_    K A P T G R K T K W K M N E Y R A I E V H E S S R N A T S - - K L R H E F S L C R V Y V V S G S F R A F D R R P - - - -
 
AT5G22380.1     Q T E R M L T S D V A V A E T S F R V E S S L E T S I S G G E H I D - - - - - V S M N T E F V D G L S E P M W D W - - -
pt021927_POPTR_    - - - - - L E A D P I T V E M T - - - - S S P E T S Y S G G D H V D Y P G T A A S A N - - - - - - - - - - - - - W G L I
 
AT5G22380.1     - - - - E Q L T W - - P - - - - -
pt021927_POPTR_    L H G N D R N N W I G P A Q I D L
 
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