fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G22380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030347 not found in 266aa AT5G22380.1 1st_1st 0.557017543 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G22380.1     -------------------MADEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPV
pt030347_POPTR_ MLIQLRLTREQDTRTRTRTRMEELPLGYRFYPTEEELISFYLHNKLGGGRQERLQRVIPD
                                     :*:.:*:*********:****:*:* *  :: ::**** 

AT5G22380.1     LDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPV
pt030347_POPTR_ ISIYDIEPWDLPKLSGELCQGDTEQWFFFTPRQEREARGGRPNRTTASGYWKATGSPGYV
                :.::::** .**:::*  *:**:******.************.***.*********** *

AT5G22380.1     FSKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAV---DETVNASTIPKLRREFSLCR
pt030347_POPTR_ YSSDNRVIGLKKTMVFYTGKAPRGRKTKWKMNEYRAIEVHESSSNAT--PKLRHEFSLCR
                :*.**::** ************ ***********:*:   :.: **:  ****:******

AT5G22380.1     VYITTGSSRAFDRRPEGVLQTERMLTSDVAVA-----ETSFRVESSLETSISGGEHID--
pt030347_POPTR_ VYVVSGSFRAFDRRPLEAVTRETQLLGDGATTSAQGPDPTVDMTSSPETSYSVEDHVDHP
                **:.:** *******  .:  *  * .* *.:     :.:. : ** *** *  :*:*  

AT5G22380.1     ---VSMNTEFVDGLSEPMWDWE-QLTWP
pt030347_POPTR_ GTAASANWGSVDGLEPPAWEWPGQLDWP
                   .* *   ****. * *:*  ** **
BoxShade v3.31 C (beta, 970507) Output
AT5G22380.1     - - - - - - - - - - - - - - - - - - - M A D E V T I G F R F Y P T E E E L V S F Y L R N Q L E G R S D D S M H R V I P V
pt030347_POPTR_    M L I Q L R L T R E Q D T R T R T R T R M E E L P L G Y R F Y P T E E E L I S F Y L H N K L G G G R Q E R L Q R V I P D
 
AT5G22380.1     L D V F E V E P S H L P N V A G V R C R G D A E Q W F F F V P R Q E R E A R G G R P S R T T G S G Y W K A T G S P G P V
pt030347_POPTR_    I S I Y D I E P W D L P K L S G E L C Q G D T E Q W F F F T P R Q E R E A R G G R P N R T T A S G Y W K A T G S P G Y V
 
AT5G22380.1     F S K D N K M I G A K K T M V F Y T G K A P T G R K T K W K M N E Y H A V - - - D E T V N A S T I P K L R R E F S L C R
pt030347_POPTR_    Y S S D N R V I G L K K T M V F Y T G K A P R G R K T K W K M N E Y R A I E V H E S S S N A T - - P K L R H E F S L C R
 
AT5G22380.1     V Y I T T G S S R A F D R R P E G V L Q T E R M L T S D V A V A - - - - - E T S F R V E S S L E T S I S G G E H I D - -
pt030347_POPTR_    V Y V V S G S F R A F D R R P L E A V T R E T Q L L G D G A T T S A Q G P D P T V D M T S S P E T S Y S V E D H V D H P
 
AT5G22380.1     - - - V S M N T E F V D G L S E P M W D W E - Q L T W P
pt030347_POPTR_    G T A A S A N W G S V D G L E P P A W E W P G Q L D W P
 
0