fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G22380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034070 not found in 244aa AT5G22380.1 1st_1st 0.563596491 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G22380.1     MADEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRC
gm034070_Glyma1 -MDDLPPGFRFYPTEEELVFFYLHNQLEGQIHDT-SRVIPVIDINGVEPWNLPSLAGELC
                  *::. ************ ***:*****: .*:  *****:*:  *** :**.:**  *

AT5G22380.1     RGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTG
gm034070_Glyma1 RGDTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGHVYSSDNKVIGMKKTMVFYKG
                ***:****** ************.***.*********** *:*.***:** *******.*

AT5G22380.1     KAPTGRKTKWKMNEYHAVDETVNASTI-PKLRREFSLCRVYITTGSSRAFDRRPEGVLQT
gm034070_Glyma1 KAPTGRKTKWKMHEYKAIEHSDQSNTAPPKLRHEFSLCRVYVISGSFRSFDRRPLDMPRV
                ************:**:*::.: ::.*  ****:********: :** *:***** .: :.

AT5G22380.1     E-RMLTSDVAVAETSFRVE--SSLETSISGGE-HI------DVSMNTEFVDGLSEPMWDW
gm034070_Glyma1 ELRVVDGDRGAASTSAQAQQRSSSHTSHSGGDAHVTDAGAGSSGTNWNASNRVEEPLWEW
                * *:: .* ..*.** :.:  ** .** ***: *:      . . * :  : :.**:*:*

AT5G22380.1     EQLTWP
gm034070_Glyma1 EQLDWP
                *** **
BoxShade v3.31 C (beta, 970507) Output
AT5G22380.1     M A D E V T I G F R F Y P T E E E L V S F Y L R N Q L E G R S D D S M H R V I P V L D V F E V E P S H L P N V A G V R C
gm034070_Glyma1    - M D D L P P G F R F Y P T E E E L V F F Y L H N Q L E G Q I H D T - S R V I P V I D I N G V E P W N L P S L A G E L C
 
AT5G22380.1     R G D A E Q W F F F V P R Q E R E A R G G R P S R T T G S G Y W K A T G S P G P V F S K D N K M I G A K K T M V F Y T G
gm034070_Glyma1    R G D T E Q W F F F S P R Q E R E A R G G R P N R T T A S G Y W K A T G S P G H V Y S S D N K V I G M K K T M V F Y K G
 
AT5G22380.1     K A P T G R K T K W K M N E Y H A V D E T V N A S T I - P K L R R E F S L C R V Y I T T G S S R A F D R R P E G V L Q T
gm034070_Glyma1    K A P T G R K T K W K M H E Y K A I E H S D Q S N T A P P K L R H E F S L C R V Y V I S G S F R S F D R R P L D M P R V
 
AT5G22380.1     E - R M L T S D V A V A E T S F R V E - - S S L E T S I S G G E - H I - - - - - - D V S M N T E F V D G L S E P M W D W
gm034070_Glyma1    E L R V V D G D R G A A S T S A Q A Q Q R S S S H T S H S G G D A H V T D A G A G S S G T N W N A S N R V E E P L W E W
 
AT5G22380.1     E Q L T W P
gm034070_Glyma1    E Q L D W P
 
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