fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G22890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019369 not found in 406aa AT5G22890.1 1st_1st 0.474198047 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G22890.1     MHIHMMNRDEHIAKKVEGSISSFSGETSTSSKQIYV------NPVTTTGTKSMEDDDVSL
pt019369_POPTR_ --------------MISGDSSCFP---SASSQGLHMYQAVTEDVVSSTLEASSSSEAHSN
                               :.*. *.*.   *:**: :::      : *::*   * ..:  * 

AT5G22890.1     SLLYNLSTLHEKVHQIQSLVSFYMVSTNNINQSSGSTSLAVANIGSLVQEIITAASSMLY
pt019369_POPTR_ SLLYNLSLLKDKVHQVESLISILIAPDHSQPNDHKSTSVALANMSTMIQEIIVAASSVMF
                ******* *::****::**:*: :.. :.  :.  ***:*:**:.:::****.****:::

AT5G22890.1     TCQQLQIGSNNNNNDIDNDQTVDAMVLEFSRQETDPGHDFVQESTNL----FG-------
pt019369_POPTR_ TCQQMGIGNDISGNNINTNDL------------HQPRGRKAEESSLLSQPNFGGNHAGNI
                ****: **.: ..*:*:.::              :*    .:**: *    **       

AT5G22890.1     VQERGQISFPDQNLDW----YN-----TETI-------NPKKDKHRSKPSSG--------
pt019369_POPTR_ GQERGQSFFSPESFDWCSDNYNDNCNTNENIRGIHVSSNNRVDIRREILSQGGEGILQGQ
                 *****  *. :.:**    **     .*.*       * : * :*.  *.*        

AT5G22890.1     ---SYDILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISP----
pt019369_POPTR_ SPKNYDIIELDAADLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTTAALSNPMKNN
                   .***:***.************:************************  ** .*    

AT5G22890.1     ---TSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCR
pt019369_POPTR_ PTATPENKEASMKLPRK-YSCPHEGCRWNRKHAKFQPLKSMICVKNHYKRSHCPKMYVCK
                   *.::*:.. .* :: ****:.*****::* *******:**.*************:*:

AT5G22890.1     RCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGHVPA-HGSSKPP
pt019369_POPTR_ RCSRKQFSVLSDLRTHEKHCGDLKWLCSCGTTFSRKDKLMGHVALFFGHTPAISGLTRPT
                *** *:****************:**:*****.********.**:**:**.**  * ::*.

AT5G22890.1     TI---TLK--------
pt019369_POPTR_ KFENQTMQMHLDHDRG
                .:   *::
BoxShade v3.31 C (beta, 970507) Output
AT5G22890.1     M H I H M M N R D E H I A K K V E G S I S S F S G E T S T S S K Q I Y V - - - - - - N P V T T T G T K S M E D D D V S L
pt019369_POPTR_    - - - - - - - - - - - - - - M I S G D S S C F P - - - S A S S Q G L H M Y Q A V T E D V V S S T L E A S S S S E A H S N
 
AT5G22890.1     S L L Y N L S T L H E K V H Q I Q S L V S F Y M V S T N N I N Q S S G S T S L A V A N I G S L V Q E I I T A A S S M L Y
pt019369_POPTR_    S L L Y N L S L L K D K V H Q V E S L I S I L I A P D H S Q P N D H K S T S V A L A N M S T M I Q E I I V A A S S V M F
 
AT5G22890.1     T C Q Q L Q I G S N N N N N D I D N D Q T V D A M V L E F S R Q E T D P G H D F V Q E S T N L - - - - F G - - - - - - -
pt019369_POPTR_    T C Q Q M G I G N D I S G N N I N T N D L - - - - - - - - - - - - H Q P R G R K A E E S S L L S Q P N F G G N H A G N I
 
AT5G22890.1     V Q E R G Q I S F P D Q N L D W - - - - Y N - - - - - T E T I - - - - - - - N P K K D K H R S K P S S G - - - - - - - -
pt019369_POPTR_    G Q E R G Q S F F S P E S F D W C S D N Y N D N C N T N E N I R G I H V S S N N R V D I R R E I L S Q G G E G I L Q G Q
 
AT5G22890.1     - - - S Y D I L E L D V A D L L A K Y T H Y C Q I C G K G F K R D A N L R M H M R A H G D E Y K T R E A L I S P - - - -
pt019369_POPTR_    S P K N Y D I I E L D A A D L L A K Y T H Y C Q V C G K G F K R D A N L R M H M R A H G D E Y K T T A A L S N P M K N N
 
AT5G22890.1     - - - T S Q D K K G G Y S L K K H Y Y S C P Q H G C R W N Q R H E K F Q P L K S V I C A K N H Y K R S H C P K M Y M C R
pt019369_POPTR_    P T A T P E N K E A S M K L P R K - Y S C P H E G C R W N R K H A K F Q P L K S M I C V K N H Y K R S H C P K M Y V C K
 
AT5G22890.1     R C S V K H F S V L S D L R T H E K H C G D I K W V C S C G T K F S R K D K L M S H V S L F L G H V P A - H G S S K P P
pt019369_POPTR_    R C S R K Q F S V L S D L R T H E K H C G D L K W L C S C G T T F S R K D K L M G H V A L F F G H T P A I S G L T R P T
 
AT5G22890.1     T I - - - T L K - - - - - - - -
pt019369_POPTR_    K F E N Q T M Q M H L D H D R G
 
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