fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G22890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037877 not found in 238aa AT5G22890.1 1st_1st 0.422594142 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G22890.1     MHIHMMNRDEHIAKKVEGSISSFSGETSTSSKQIYVNPVTTTGTKSMEDDDVSLSLLYNL
gm037877_Glyma1 ------------------------------------------------------------
                                                                            

AT5G22890.1     STLHEKVHQIQSLVSFYMVSTNNINQSSGSTSLAVANIGSLVQEIITAASSMLYTCQQLQ
gm037877_Glyma1 --------------------------------MAISSMNSIIQEIIVTATSMMFTCQQMA
                                                :*::.:.*::****.:*:**::****: 

AT5G22890.1     IGSNNNNNDIDNDQTVDAMVLEFSRQETDPGHDFVQESTNLFGVQERGQISFPDQNLDWY
gm037877_Glyma1 L-------------------------TTPPGSDNISDHQGLFSSTE-------SETLDWF
                :                          * ** * :.:  .**.  *       .:.***:

AT5G22890.1     NTETINPKKDKHRSKPSSGSYDILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHG
gm037877_Glyma1 STESYNNNIDNSNSNISKMNSDIIELDAANLLAKYTHYCQVCGKGFERDANLRMHMRAHG
                .**: * : *: .*: *. . **:***.*:**********:*****:*************

AT5G22890.1     DEYKTREALISPTSQDK---KGG----YSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICA
gm037877_Glyma1 DEYKTNAALSNPIKNKGNLLEGGRECLMSTVKPKYSCPQEGCRWNQRHVKFQPLKSMICA
                *****. ** .* .:.    :**     *  *  *****.******** *******:***

AT5G22890.1     KNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVS
gm037877_Glyma1 KNHYKRSHCPKMYVCKRCNQKQFSVLSDLRTHEKHCGDLKWQCTCGTSFSRKDKLMGHVA
                *************:*:**. *:****************:** *:***.********.**:

AT5G22890.1     LFLGHVPAHGSSKPPTITLK
gm037877_Glyma1 LF------------------
                **
BoxShade v3.31 C (beta, 970507) Output
AT5G22890.1     M H I H M M N R D E H I A K K V E G S I S S F S G E T S T S S K Q I Y V N P V T T T G T K S M E D D D V S L S L L Y N L
gm037877_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G22890.1     S T L H E K V H Q I Q S L V S F Y M V S T N N I N Q S S G S T S L A V A N I G S L V Q E I I T A A S S M L Y T C Q Q L Q
gm037877_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A I S S M N S I I Q E I I V T A T S M M F T C Q Q M A
 
AT5G22890.1     I G S N N N N N D I D N D Q T V D A M V L E F S R Q E T D P G H D F V Q E S T N L F G V Q E R G Q I S F P D Q N L D W Y
gm037877_Glyma1    L - - - - - - - - - - - - - - - - - - - - - - - - - T T P P G S D N I S D H Q G L F S S T E - - - - - - - S E T L D W F
 
AT5G22890.1     N T E T I N P K K D K H R S K P S S G S Y D I L E L D V A D L L A K Y T H Y C Q I C G K G F K R D A N L R M H M R A H G
gm037877_Glyma1    S T E S Y N N N I D N S N S N I S K M N S D I I E L D A A N L L A K Y T H Y C Q V C G K G F E R D A N L R M H M R A H G
 
AT5G22890.1     D E Y K T R E A L I S P T S Q D K - - - K G G - - - - Y S L K K H Y Y S C P Q H G C R W N Q R H E K F Q P L K S V I C A
gm037877_Glyma1    D E Y K T N A A L S N P I K N K G N L L E G G R E C L M S T V K P K Y S C P Q E G C R W N Q R H V K F Q P L K S M I C A
 
AT5G22890.1     K N H Y K R S H C P K M Y M C R R C S V K H F S V L S D L R T H E K H C G D I K W V C S C G T K F S R K D K L M S H V S
gm037877_Glyma1    K N H Y K R S H C P K M Y V C K R C N Q K Q F S V L S D L R T H E K H C G D L K W Q C T C G T S F S R K D K L M G H V A
 
AT5G22890.1     L F L G H V P A H G S S K P P T I T L K
gm037877_Glyma1    L F - - - - - - - - - - - - - - - - - -
 
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