fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019847 not found in 362aa AT5G57620.1 1st_not 0.405745062 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G23000.1     MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN
pt019847_POPTR_ MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN
                *********::**:***********::******.*****::* ****:************

AT5G23000.1     YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS
pt019847_POPTR_ YLRPNLKHGEFSDEEDRVICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLM--
                *****:***:**:****:* ****:**********:*****************:***:  

AT5G23000.1     SSDSSSSAMASPYLNPISQDVKRPT--SPTTIPSSSYN-P--YAENPNQYPTKSLISSIN
pt019847_POPTR_ -------AMA-----PQSQR-KPPTFQSPHQTPPLSHSLPSMYKDSGGSFSYYSQNRSFT
                       ***     * **  * **  **   *. *:. *  * :. ..:.  *   *:.

AT5G23000.1     GFEAGDKQIISYINPNYPQDLYLSDSNNNTSNANGFLL--------------NHNMCDQY
pt019847_POPTR_ GFEP-----ISQI----PSSLL---STNSVSLATNSLLFQTTQEGLFSPMQYYHPVKDNY
                ***.     ** *    *..*    *.*..* *.. **               * : *:*

AT5G23000.1     K---NHTSFSSDVNGIRSEIM----MKQEEIMM--MMMIDHHIDQRTK-----GYNG-EF
pt019847_POPTR_ MVFGSEASCSSNSDGSCSLISYGREIKQEDMGFHSLMSSNGYGDQNQKVMLGSGNNGVEI
                    ..:* **: :*  * *     :***:: :  :*  : : **. *     * ** *:

AT5G23000.1     TQGYYNYYNGH-----------GDLKQMISGTGTNSNINMGGSGSSSSSISNLAENKSSG
pt019847_POPTR_ LNQWVEKPNGNIGETPSDYDFIEDVKQQVSSSGNHNDVN----GSNNNDNLLIDENKTPE
                 : : :  **:            *:** :*.:*.:.::*    **....   : ***:. 

AT5G23000.1     SLL------LEYK----CL--PYFYS-------
pt019847_POPTR_ TVIDLGIDDDDYDDVVMCMYGPHSLANHPPKSR
                :::       :*.    *:  *:  :
BoxShade v3.31 C (beta, 970507) Output
AT5G23000.1     M G R A P C C D K T K V K R G P W S P E E D S K L R D Y I E K Y G N G G N W I S F P L K A G L R R C G K S C R L R W L N
pt019847_POPTR_    M G R A P C C D K A N V K K G P W S P E E D S K L K E Y I E K Y G T G G N W I A L P Q K A G L K R C G K S C R L R W L N
 
AT5G23000.1     Y L R P N I K H G D F S E E E D R I I F S L F A A I G S R W S I I A A H L P G R T D N D I K N Y W N T K L R K K L L S S
pt019847_POPTR_    Y L R P N L K H G E F S D E E D R V I C S L F A S I G S R W S I I A A Q L P G R T D N D I K N Y W N T K L K K K L M - -
 
AT5G23000.1     S S D S S S S A M A S P Y L N P I S Q D V K R P T - - S P T T I P S S S Y N - P - - Y A E N P N Q Y P T K S L I S S I N
pt019847_POPTR_    - - - - - - - A M A - - - - - P Q S Q R - K P P T F Q S P H Q T P P L S H S L P S M Y K D S G G S F S Y Y S Q N R S F T
 
AT5G23000.1     G F E A G D K Q I I S Y I N P N Y P Q D L Y L S D S N N N T S N A N G F L L - - - - - - - - - - - - - - N H N M C D Q Y
pt019847_POPTR_    G F E P - - - - - I S Q I - - - - P S S L L - - - S T N S V S L A T N S L L F Q T T Q E G L F S P M Q Y Y H P V K D N Y
 
AT5G23000.1     K - - - N H T S F S S D V N G I R S E I M - - - - M K Q E E I M M - - M M M I D H H I D Q R T K - - - - - G Y N G - E F
pt019847_POPTR_    M V F G S E A S C S S N S D G S C S L I S Y G R E I K Q E D M G F H S L M S S N G Y G D Q N Q K V M L G S G N N G V E I
 
AT5G23000.1     T Q G Y Y N Y Y N G H - - - - - - - - - - - G D L K Q M I S G T G T N S N I N M G G S G S S S S S I S N L A E N K S S G
pt019847_POPTR_    L N Q W V E K P N G N I G E T P S D Y D F I E D V K Q Q V S S S G N H N D V N - - - - G S N N N D N L L I D E N K T P E
 
AT5G23000.1     S L L - - - - - - L E Y K - - - - C L - - P Y F Y S - - - - - - -
pt019847_POPTR_    T V I D L G I D D D D Y D D V V M C M Y G P H S L A N H P P K S R
 
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