fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022407 not found in 338aa AT5G57620.1 not_not 0.405745062 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G23000.1     MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN
pt022407_POPTR_ MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN
                *********::**:***********::******.*****::* ****:************

AT5G23000.1     YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS
pt022407_POPTR_ YLRPNIKHGEFSDEEDRVICSLFANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLM--
                *********:**:****:* **** **********:*****************:***:  

AT5G23000.1     SSDSSSSAMASPYLNPISQDVKRPTSPTT------IPSSS-YNPYAENPNQYPTKSLISS
pt022407_POPTR_ -------AMA-----PQSQR-KTPPFPSSDQTDPPLPSHSLLSIYKDSGGSFSYYSQNKS
                       ***     * **  * *. *::      :** *  . * :. ..:.  *  .*

AT5G23000.1     INGFEAGDKQIISYINPNYPQDLYLSDSNNNTSNANGFLLNHNMCDQ-------------
pt022407_POPTR_ FTGFDP-----ISQI----PSSLL---SNNNVSFATNSLLFQPTSQEGLFSPMQYYHPAV
                :.**:.     ** *    *..*    ****.* *.. ** :  .::             

AT5G23000.1     ------YKNHTSFSSDVNGIRSEIMMKQEEIMMMMMIDHHIDQRTKGYNGEFTQGYYNYY
pt022407_POPTR_ KDNFLVFGSEASCSSNSDGSCSQISYGRYEIKQEDMGFHSL-MSNNGYENYQNQKFMLSY
                      : ..:* **: :*  *:*   : **    *  * :   .:**:.  .* :   *

AT5G23000.1     NGHG--DLKQMISGTGTNSNINMGGSGS------------SSSSISNLA---------EN
pt022407_POPTR_ GNHGVENLNQWVE----KPNGNTGETPSDYDLVEDVKQLISSSSNNNIIPCNDSLLIDEN
                ..**  :*:* :.    :.* * * : *            **** .*:          **

AT5G23000.1     KSSGSLLLEYKCLPYFYS
pt022407_POPTR_ KTQEKVM-------YYY-
                *:. .::       *:*
BoxShade v3.31 C (beta, 970507) Output
AT5G23000.1     M G R A P C C D K T K V K R G P W S P E E D S K L R D Y I E K Y G N G G N W I S F P L K A G L R R C G K S C R L R W L N
pt022407_POPTR_    M G R A P C C D K A N V K K G P W S P E E D S K L K E Y I E K Y G T G G N W I A L P Q K A G L K R C G K S C R L R W L N
 
AT5G23000.1     Y L R P N I K H G D F S E E E D R I I F S L F A A I G S R W S I I A A H L P G R T D N D I K N Y W N T K L R K K L L S S
pt022407_POPTR_    Y L R P N I K H G E F S D E E D R V I C S L F A N I G S R W S I I A A Q L P G R T D N D I K N Y W N T K L K K K L M - -
 
AT5G23000.1     S S D S S S S A M A S P Y L N P I S Q D V K R P T S P T T - - - - - - I P S S S - Y N P Y A E N P N Q Y P T K S L I S S
pt022407_POPTR_    - - - - - - - A M A - - - - - P Q S Q R - K T P P F P S S D Q T D P P L P S H S L L S I Y K D S G G S F S Y Y S Q N K S
 
AT5G23000.1     I N G F E A G D K Q I I S Y I N P N Y P Q D L Y L S D S N N N T S N A N G F L L N H N M C D Q - - - - - - - - - - - - -
pt022407_POPTR_    F T G F D P - - - - - I S Q I - - - - P S S L L - - - S N N N V S F A T N S L L F Q P T S Q E G L F S P M Q Y Y H P A V
 
AT5G23000.1     - - - - - - Y K N H T S F S S D V N G I R S E I M M K Q E E I M M M M M I D H H I D Q R T K G Y N G E F T Q G Y Y N Y Y
pt022407_POPTR_    K D N F L V F G S E A S C S S N S D G S C S Q I S Y G R Y E I K Q E D M G F H S L - M S N N G Y E N Y Q N Q K F M L S Y
 
AT5G23000.1     N G H G - - D L K Q M I S G T G T N S N I N M G G S G S - - - - - - - - - - - - S S S S I S N L A - - - - - - - - - E N
pt022407_POPTR_    G N H G V E N L N Q W V E - - - - K P N G N T G E T P S D Y D L V E D V K Q L I S S S S N N N I I P C N D S L L I D E N
 
AT5G23000.1     K S S G S L L L E Y K C L P Y F Y S
pt022407_POPTR_    K T Q E K V M - - - - - - - Y Y Y -
 
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