fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046871 not found in 159aa AT5G23090.4 not_not 0.754578754 III
Gm015885 not found in 113aa AT5G23090.4 not_not 0.717948717 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G23090.1     MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND
gm046871_Glyma1 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
gm015885_Glyma0 MEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
                *:*******:*************************************************:

AT5G23090.1     VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQ---RSVKWNPGAQ
gm046871_Glyma1 VCNREDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKLETMDSLRGGGGGGKWNNGAE
gm015885_Glyma0 VCNKEERRTIAPEHVLKALGVLGFGEYIEEVYAAYEQHKLETM-----------------
                ***:*::************ ******************* ***                 

AT5G23090.1     MTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRSPQS
gm046871_Glyma1 MTEEEALAEQQRMFAEARARMNGGAIASK--QPDADQSLDS-
gm015885_Glyma0 ----------------VIVYVN-------------DQCA---
                                . . :*             **
BoxShade v3.31 C (beta, 970507) Output
AT5G23090.1     M D P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N D
gm046871_Glyma1    M E P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
gm015885_Glyma0    M E P M D I V G K A K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
 
AT5G23090.1     V C N K E D K R T I A P E H V L K A L Q V L G F G E Y I E E V Y A A Y E Q H K Y E T M Q D T Q - - - R S V K W N P G A Q
gm046871_Glyma1    V C N R E D K R T I A P E H V L K A L Q V L G F G E Y I E E V Y A A Y E Q H K L E T M D S L R G G G G G G K W N N G A E
gm015885_Glyma0    V C N K E E R R T I A P E H V L K A L G V L G F G E Y I E E V Y A A Y E Q H K L E T M - - - - - - - - - - - - - - - - -
 
AT5G23090.1     M T E E E A A A E Q Q R M F A E A R A R M N G G V S V P Q P E H P E T D Q R S P Q S
gm046871_Glyma1    M T E E E A L A E Q Q R M F A E A R A R M N G G A I A S K - - Q P D A D Q S L D S -
gm015885_Glyma0    - - - - - - - - - - - - - - - - V I V Y V N - - - - - - - - - - - - - D Q C A - - -
 
0