fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030776 not found in 454aa AT5G08190.2 1st_not 0.677655677 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G23090.1     --------------------------------------------------------MDPM
Sb030776_Sorbi1 NPTFFHPRIVPGSPRALTLAPRFHSAPSRILARIRSRGALATSPAFRRADSVPRLEMDPM
                                                                        ****

AT5G23090.1     DIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNK
Sb030776_Sorbi1 DIVGKSKEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSR
                *********.****:** *********************:*********:*****:**.:

AT5G23090.1     EDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKWNPGAQMTEEEAA
Sb030776_Sorbi1 EEKKTIAPEHVLKALSDLGFREYIEEVYAAYEQHKLDTL-DSPKASKFT-GIEMTEEEAV
                *:*:***********. *** ************** :*: *: :: *:. * :******.

AT5G23090.1     AEQQRMFAEARARMNGGVSVPQPEHPETD-------------------------------
Sb030776_Sorbi1 AEQQRMFAEARARMNNG--APKPKEPEQDPPQQPQAQPQLQLHTQTQQPMQSQLQLHSLT
                ***************.*  .*:*:.** *                               

AT5G23090.1     --------QRSPQS----------------------------------------------
Sb030776_Sorbi1 QHSLQPQLQLQPQSQPQQLPQVQLHPQPQQQTQVQMHPHPPQPPQVQVHPQPSQPQVQIH
                        * .***                                              

AT5G23090.1     ---------------------------------------------------------
Sb030776_Sorbi1 PQPQQPPQVQLHSSAQQASQPEPQVHLQSQEPSQAQLQSQLPGQLQTQAQSGPGVDS
BoxShade v3.31 C (beta, 970507) Output
AT5G23090.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D P M
Sb030776_Sorbi1    N P T F F H P R I V P G S P R A L T L A P R F H S A P S R I L A R I R S R G A L A T S P A F R R A D S V P R L E M D P M
 
AT5G23090.1     D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N D V C N K
Sb030776_Sorbi1    D I V G K S K E D V S L P K S T M F K I I K E M L P P D V R V A R D A Q D L L V E C C V E F I N L L S S E S N E V C S R
 
AT5G23090.1     E D K R T I A P E H V L K A L Q V L G F G E Y I E E V Y A A Y E Q H K Y E T M Q D T Q R S V K W N P G A Q M T E E E A A
Sb030776_Sorbi1    E E K K T I A P E H V L K A L S D L G F R E Y I E E V Y A A Y E Q H K L D T L - D S P K A S K F T - G I E M T E E E A V
 
AT5G23090.1     A E Q Q R M F A E A R A R M N G G V S V P Q P E H P E T D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030776_Sorbi1    A E Q Q R M F A E A R A R M N N G - - A P K P K E P E Q D P P Q Q P Q A Q P Q L Q L H T Q T Q Q P M Q S Q L Q L H S L T
 
AT5G23090.1     - - - - - - - - Q R S P Q S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030776_Sorbi1    Q H S L Q P Q L Q L Q P Q S Q P Q Q L P Q V Q L H P Q P Q Q Q T Q V Q M H P H P P Q P P Q V Q V H P Q P S Q P Q V Q I H
 
AT5G23090.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030776_Sorbi1    P Q P Q Q P P Q V Q L H S S A Q Q A S Q P E P Q V H L Q S Q E P S Q A Q L Q S Q L P G Q L Q T Q A Q S G P G V D S
 
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