fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011605 not found in 157aa AT5G23090.1 not_1st 0.772893772 II
Gm015883 not found in 156aa AT5G23090.1 not_1st 0.772893772 II
Gm011606 not found in 156aa AT5G23090.1 not_1st 0.765567765 II
Gm015887 not found in 136aa AT5G23090.1 not_1st 0.641025641 II
Gm015886 not found in 133aa AT5G23090.1 not_1st 0.564102564 II
Gm015884 not found in 152aa AT5G23090.1 not_1st 0.560439560 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G23090.1     MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND
gm015886_Glyma0 MEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
gm015884_Glyma0 MEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
gm011606_Glyma0 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
gm015883_Glyma0 MEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
gm015887_Glyma0 --------------------MTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
gm011605_Glyma0 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
                                    ***************************************:

AT5G23090.1     VCNKEDKRTIAPEHVLKALQV--------------------------------------L
gm015886_Glyma0 VCNKEERRTIAPEHVLKALG----------------------------------------
gm015884_Glyma0 VCNKEERRTIAPEHVLKALGVFLKLLNCCIAKVFMQIRSNLCLINYVISSLKCCFLFCIL
gm011606_Glyma0 VCNREDKRTIAPEHVLKALQV--------------------------------------L
gm015883_Glyma0 VCNKEERRTIAPEHVLKALGV--------------------------------------L
gm015887_Glyma0 VCNKEERRTIAPEHVLKALGV--------------------------------------L
gm011605_Glyma0 VCNREDKRTIAPEHVLKALQV--------------------------------------L
                ***:*::************                                         

AT5G23090.1     GFGEYIEEVYAAYEQHKYETMQDTQR-SVKWNPGAQMTEEEAAAEQQRMFAEARARMNGG
gm015886_Glyma0 ---------------------QDSLK-GAKWSNRAEMTEEEALAEQQRMFAEARARMNGG
gm015884_Glyma0 NFNFYLVSFYVSL---------------------LSICEVPVILE---IFFFCVAL----
gm011606_Glyma0 GFGEYVEEVYAAYEQHKLETM-DSLRGGGKWSNGAEMTEEEALAEQQRMFAEARARMNGG
gm015883_Glyma0 GFGEYIEEVYAAYEQHKLETMQDSLK-GAKWSNRAEMTEEEALAEQQRMFAEARARMNGG
gm015887_Glyma0 GFGEYIEEVYAAYEQHKLETMQDSLK-GAKWSNRAEMTEEEALAEQQRMFAEARARMNGG
gm011605_Glyma0 GFGEYVEEVYAAYEQHKLETMQDSLRGGGKWSNGAEMTEEEALAEQQRMFAEARARMNGG
                                                   .: *  .  *   :*  . *     

AT5G23090.1     VSVPQPEHPETDQRSPQS
gm015886_Glyma0 AI--QSKEPEADQ-SLES
gm015884_Glyma0 ------------------
gm011606_Glyma0 AI--ASKQPDADQ-SLDS
gm015883_Glyma0 AI--QSKEPEADQ-SLES
gm015887_Glyma0 AI--QSKEPEADQ-SLES
gm011605_Glyma0 AI--ASKQPDADQ-SLDS
BoxShade v3.31 C (beta, 970507) Output
AT5G23090.1     M D P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N D
gm015886_Glyma0    M E P M D I V G K A K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
gm015884_Glyma0    M E P M D I V G K A K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
gm011606_Glyma0    M E P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
gm015883_Glyma0    M E P M D I V G K A K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
gm015887_Glyma0    - - - - - - - - - - - - - - - - - - - - M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
gm011605_Glyma0    M E P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
 
AT5G23090.1     V C N K E D K R T I A P E H V L K A L Q V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L
gm015886_Glyma0    V C N K E E R R T I A P E H V L K A L G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm015884_Glyma0    V C N K E E R R T I A P E H V L K A L G V F L K L L N C C I A K V F M Q I R S N L C L I N Y V I S S L K C C F L F C I L
gm011606_Glyma0    V C N R E D K R T I A P E H V L K A L Q V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L
gm015883_Glyma0    V C N K E E R R T I A P E H V L K A L G V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L
gm015887_Glyma0    V C N K E E R R T I A P E H V L K A L G V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L
gm011605_Glyma0    V C N R E D K R T I A P E H V L K A L Q V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L
 
AT5G23090.1     G F G E Y I E E V Y A A Y E Q H K Y E T M Q D T Q R - S V K W N P G A Q M T E E E A A A E Q Q R M F A E A R A R M N G G
gm015886_Glyma0    - - - - - - - - - - - - - - - - - - - - - Q D S L K - G A K W S N R A E M T E E E A L A E Q Q R M F A E A R A R M N G G
gm015884_Glyma0    N F N F Y L V S F Y V S L - - - - - - - - - - - - - - - - - - - - - L S I C E V P V I L E - - - I F F F C V A L - - - -
gm011606_Glyma0    G F G E Y V E E V Y A A Y E Q H K L E T M - D S L R G G G K W S N G A E M T E E E A L A E Q Q R M F A E A R A R M N G G
gm015883_Glyma0    G F G E Y I E E V Y A A Y E Q H K L E T M Q D S L K - G A K W S N R A E M T E E E A L A E Q Q R M F A E A R A R M N G G
gm015887_Glyma0    G F G E Y I E E V Y A A Y E Q H K L E T M Q D S L K - G A K W S N R A E M T E E E A L A E Q Q R M F A E A R A R M N G G
gm011605_Glyma0    G F G E Y V E E V Y A A Y E Q H K L E T M Q D S L R G G G K W S N G A E M T E E E A L A E Q Q R M F A E A R A R M N G G
 
AT5G23090.1     V S V P Q P E H P E T D Q R S P Q S
gm015886_Glyma0    A I - - Q S K E P E A D Q - S L E S
gm015884_Glyma0    - - - - - - - - - - - - - - - - - -
gm011606_Glyma0    A I - - A S K Q P D A D Q - S L D S
gm015883_Glyma0    A I - - Q S K E P E A D Q - S L E S
gm015887_Glyma0    A I - - Q S K E P E A D Q - S L E S
gm011605_Glyma0    A I - - A S K Q P D A D Q - S L D S
 
0