fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046870 not found in 160aa AT5G23090.1 1st_1st 0.780219780 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G23090.1     MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND
gm046870_Glyma1 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
                *:*********************************************************:

AT5G23090.1     VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQR----SVKWNPGA
gm046870_Glyma1 VCNREDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKLETMQDSLRGGGGGGKWNNGA
                ***:*********************************** *****: *    . *** **

AT5G23090.1     QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRSPQS
gm046870_Glyma1 EMTEEEALAEQQRMFAEARARMNGGAIASK--QPDADQ-SLDS
                :****** *****************. ..:  :*::** * :*
BoxShade v3.31 C (beta, 970507) Output
AT5G23090.1     M D P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N D
gm046870_Glyma1    M E P M D I V G K S K E D A S L P K A T M T K I I K E M L P P D V R V A R D A Q D L L I E C C V E F I N L V S S E S N E
 
AT5G23090.1     V C N K E D K R T I A P E H V L K A L Q V L G F G E Y I E E V Y A A Y E Q H K Y E T M Q D T Q R - - - - S V K W N P G A
gm046870_Glyma1    V C N R E D K R T I A P E H V L K A L Q V L G F G E Y I E E V Y A A Y E Q H K L E T M Q D S L R G G G G G G K W N N G A
 
AT5G23090.1     Q M T E E E A A A E Q Q R M F A E A R A R M N G G V S V P Q P E H P E T D Q R S P Q S
gm046870_Glyma1    E M T E E E A L A E Q Q R M F A E A R A R M N G G A I A S K - - Q P D A D Q - S L D S
 
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