fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000870 not found in 272aa AT5G23280.1 not_1st 0.575301204 II
Pt000869 not found in 272aa AT5G23280.1 not_1st 0.575301204 II
Pt037062 not found in 269aa AT5G23280.1 not_1st 0.569277108 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G23280.1     MSINNNNNNNNNNNDGLMIS----------------SNGALIEQQPSVVVKKPPAKDRHS
pt037062_POPTR_ MS-----DNSGAVNNGSLIDPQRNQPPGGGGGGGGVTNGAL-------VAKKPPSKDRHS
pt000869_POPTR_ MS-----DNSGAVNNGALIDPQRNQPPGGGGGGGA-TNGAL-------AVKKPPSKDRHS
pt000870_POPTR_ MS-----DNSGAVNNGALIDPQRNQPPGGGGGGGA-TNGAL-------AVKKPPSKDRHS
                **     :*..  *:* :*.                :****       ..****:*****

AT5G23280.1     KVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS
pt037062_POPTR_ KVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS
pt000869_POPTR_ KVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS
pt000870_POPTR_ KVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS
                ************************************************************

AT5G23280.1     TASVSIRGATNST--------------SLDHKPTSLLGGTSPFILGKRVRADEDSNNSHN
pt037062_POPTR_ TVSVSVRAGGNSNSISSLSSNNIHPVGSLEHKP---LLGPAPFILGKRMRPEEDGNGG--
pt000869_POPTR_ TVSVSVRAGGNSNSISSLSSNNVHSAASLDHKP---LLGPAPFILGKRMRPEEDGN-G--
pt000870_POPTR_ TVSVSVRAGGNSNSISSLSSNNVHSAASLDHKP---LLGPAPFILGKRMRPEEDGN-G--
                *.***:*.. **.              **:***   * *.:*******:*.:**.* .  

AT5G23280.1     HSSVGKDE---------------TFT--TTPAGFWAVPARPDFGQVWSF-AGAPQEMFLQ
pt037062_POPTR_ ----GKDDDGVPVGPTIGSLMGPTAT--AGPGGFWALPARPDF---WGFAAAAPPEMVVQ
pt000869_POPTR_ ----GKDDGGVPVGPTIGSLMGPTATAAAGSGGFWALPARADF---WGF-AAAPPEMVVQ
pt000870_POPTR_ ----GKDDGGVPVGPTIGSLMGPTATAAAGSGGFWALPARADF---WGF-AAAPPEMVVQ
                    ***:               * *  : ..****:***.**   *.* *.** **.:*

AT5G23280.1     QQHHHQQPLFVHQQQQQ-QAAMGEASAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR
pt037062_POPTR_ PTAVQQSSLFMHQH----AAAMGEASAARVGNYLPGHLNLLASLSSGHGSSGRREDDHR
pt000869_POPTR_ PTAVQQSSLFMHQQHAAAAAAMGEASAARLGNYLPGHLNLLASLSGGSGSSGRREEDQR
pt000870_POPTR_ PTAVQQSSLFMHQQHAAAAAAMGEASAARLGNYLPGHLNLLASLSGGSGSSGRREEDQR
                    :*..**:**:     **********:***************.*  .*.***:* *
BoxShade v3.31 C (beta, 970507) Output
AT5G23280.1     M S I N N N N N N N N N N N D G L M I S - - - - - - - - - - - - - - - - S N G A L I E Q Q P S V V V K K P P A K D R H S
pt037062_POPTR_    M S - - - - - D N S G A V N N G S L I D P Q R N Q P P G G G G G G G G V T N G A L - - - - - - - V A K K P P S K D R H S
pt000869_POPTR_    M S - - - - - D N S G A V N N G A L I D P Q R N Q P P G G G G G G G A - T N G A L - - - - - - - A V K K P P S K D R H S
pt000870_POPTR_    M S - - - - - D N S G A V N N G A L I D P Q R N Q P P G G G G G G G A - T N G A L - - - - - - - A V K K P P S K D R H S
 
AT5G23280.1     K V D G R G R R I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S
pt037062_POPTR_    K V D G R G R R I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S
pt000869_POPTR_    K V D G R G R R I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S
pt000870_POPTR_    K V D G R G R R I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S
 
AT5G23280.1     T A S V S I R G A T N S T - - - - - - - - - - - - - - S L D H K P T S L L G G T S P F I L G K R V R A D E D S N N S H N
pt037062_POPTR_    T V S V S V R A G G N S N S I S S L S S N N I H P V G S L E H K P - - - L L G P A P F I L G K R M R P E E D G N G G - -
pt000869_POPTR_    T V S V S V R A G G N S N S I S S L S S N N V H S A A S L D H K P - - - L L G P A P F I L G K R M R P E E D G N - G - -
pt000870_POPTR_    T V S V S V R A G G N S N S I S S L S S N N V H S A A S L D H K P - - - L L G P A P F I L G K R M R P E E D G N - G - -
 
AT5G23280.1     H S S V G K D E - - - - - - - - - - - - - - - T F T - - T T P A G F W A V P A R P D F G Q V W S F - A G A P Q E M F L Q
pt037062_POPTR_    - - - - G K D D D G V P V G P T I G S L M G P T A T - - A G P G G F W A L P A R P D F - - - W G F A A A A P P E M V V Q
pt000869_POPTR_    - - - - G K D D G G V P V G P T I G S L M G P T A T A A A G S G G F W A L P A R A D F - - - W G F - A A A P P E M V V Q
pt000870_POPTR_    - - - - G K D D G G V P V G P T I G S L M G P T A T A A A G S G G F W A L P A R A D F - - - W G F - A A A P P E M V V Q
 
AT5G23280.1     Q Q H H H Q Q P L F V H Q Q Q Q Q - Q A A M G E A S A A R V G N Y L P G H L N L L A S L S G G S P G S D R R E E D P R
pt037062_POPTR_    P T A V Q Q S S L F M H Q H - - - - A A A M G E A S A A R V G N Y L P G H L N L L A S L S S G H G S S G R R E D D H R
pt000869_POPTR_    P T A V Q Q S S L F M H Q Q H A A A A A A M G E A S A A R L G N Y L P G H L N L L A S L S G G S G S S G R R E E D Q R
pt000870_POPTR_    P T A V Q Q S S L F M H Q Q H A A A A A A M G E A S A A R L G N Y L P G H L N L L A S L S G G S G S S G R R E E D Q R
 
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