fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028280 EGREDRLRLALAVSCP in 552/659 AT5G23280.1 1st_1st 0.533132530 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G23280.1     MSINNNNNNNNNNNDG--------LMISSNGALIEQQPS----VVVKKPPAKDRHSKVD-
Sb028280_Sorbi1 ----NPSGGGRDAGTGDDEELTTTLSRSAGGLLL--GPAGGGGSCCGSGPAREGGEQVEV
                    * .....: . *        *  *:.* *:   *:        . **::  .:*: 

AT5G23280.1     ---------------------------GRG----RRIR----MPIICAARVFQLTRELGH
Sb028280_Sorbi1 ALRNGEVVADPGGGRLPGHGWCGGGGGGRGYHHLRRGREAPELAEVGPRR--QRPEPRGR
                                           ***    ** *    :. : . *  * ..  *:

AT5G23280.1     KSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSLDHKPTSLLGGTSP
Sb028280_Sorbi1 GSDG----------------GLGVGAVPAD-ALAEDEGRGGVREAG---------GGGG-
                 ***                . *.*:.**. : *. . **....:.         ** . 

AT5G23280.1     FILGKRVRADEDSNNSHNHSSVGK-----------DETFTTTPAGFWAVPARPDFG-QVW
Sb028280_Sorbi1 ---GQRVRAGGGGGAERGRGGGGEGRRRGAGAGGGDD-------GGLGLAEQPLYGLAVG
                   *:****. ... .:.:.. *:           *:       *  .:. :* :*  * 

AT5G23280.1     SFAGAPQEM----FLQQQHHHQQPLFVH-------------QQQQQQAAMGE--------
Sb028280_Sorbi1 LVAELPRELEHAGRADDGHADAAPTAVHLAVTVLGGRLADGQRAGVAVAVGDRHELLVCG
                 .*  *:*:      :: * .  *  **             *:    .*:*:        

AT5G23280.1     -ASAARVGNYLPGHLNLLASLSGGSP---------GSD-----RREEDPR
Sb028280_Sorbi1 RGAAAAV---WPRRHERVARTDGGCPWPGPGPILCGSELELEWRREAV--
                 .:** *    * : : :*  .**.*         **:     ***
BoxShade v3.31 C (beta, 970507) Output
AT5G23280.1     M S I N N N N N N N N N N N D G - - - - - - - - L M I S S N G A L I E Q Q P S - - - - V V V K K P P A K D R H S K V D -
Sb028280_Sorbi1    - - - - N P S G G G R D A G T G D D E E L T T T L S R S A G G L L L - - G P A G G G G S C C G S G P A R E G G E Q V E V
 
AT5G23280.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - G R G - - - - R R I R - - - - M P I I C A A R V F Q L T R E L G H
Sb028280_Sorbi1    A L R N G E V V A D P G G G R L P G H G W C G G G G G G R G Y H H L R R G R E A P E L A E V G P R R - - Q R P E P R G R
 
AT5G23280.1     K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T A S V S I R G A T N S T S L D H K P T S L L G G T S P
Sb028280_Sorbi1    G S D G - - - - - - - - - - - - - - - - G L G V G A V P A D - A L A E D E G R G G V R E A G - - - - - - - - - G G G G -
 
AT5G23280.1     F I L G K R V R A D E D S N N S H N H S S V G K - - - - - - - - - - - D E T F T T T P A G F W A V P A R P D F G - Q V W
Sb028280_Sorbi1    - - - G Q R V R A G G G G G A E R G R G G G G E G R R R G A G A G G G D D - - - - - - - G G L G L A E Q P L Y G L A V G
 
AT5G23280.1     S F A G A P Q E M - - - - F L Q Q Q H H H Q Q P L F V H - - - - - - - - - - - - - Q Q Q Q Q Q A A M G E - - - - - - - -
Sb028280_Sorbi1    L V A E L P R E L E H A G R A D D G H A D A A P T A V H L A V T V L G G R L A D G Q R A G V A V A V G D R H E L L V C G
 
AT5G23280.1     - A S A A R V G N Y L P G H L N L L A S L S G G S P - - - - - - - - - G S D - - - - - R R E E D P R
Sb028280_Sorbi1    R G A A A A V - - - W P R R H E R V A R T D G G C P W P G P G P I L C G S E L E L E W R R E A V - -
 
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