fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026307 not found in 208aa AT5G23280.1 not_1st 0.557228915 II
Gm054250 not found in 242aa AT5G23280.1 not_1st 0.533132530 II
Gm026305 not found in 179aa AT5G23280.1 not_1st 0.442771084 II
Gm053432 not found in 176aa AT5G23280.1 not_1st 0.421686746 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G23280.1     MSINNNNNNNNNNNDGLMISSNGALIEQQ--------PSVVVKKPPAKDRHSKVDGRGRR
gm054250_Glyma2 MS----------NSDG---TTNGAITEAQRQQQQQGGKALAVKKPPSKDRHSKVDGRGRR
gm026305_Glyma0 ------------------------------------------------------------
gm053432_Glyma2 ------------------------------------------------------------
gm026307_Glyma0 MS----------NSDG---ATNA--------------------KPPSKDRHSKVDGRGRR
                                                                            

AT5G23280.1     IRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRG
gm054250_Glyma2 IRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSVIAATGTGTIPASFSSVSLS---
gm026305_Glyma0 --MPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSTV------
gm053432_Glyma2 --MPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTV------
gm026307_Glyma0 IRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSTV------
                  ***********************************:*****:** *****:.      

AT5G23280.1     ATNSTSLDHKPTSLLGGTSPFILGKRVRADEDSNNSHNHSSVGKDETFTT--------TP
gm054250_Glyma2 -SPSSTSDYKP--QLLAPTPFILGKRIRTDEDSS---------KDEAVSVGPSLVGPYAP
gm026305_Glyma0 ------SDHKP--LLPPPTPFILGKRIRPDDDSA--------AKDDAV----SLVAPPTP
gm053432_Glyma2 ------SDHKP--LLPPPTPFILGKRIRPDDDNS--------AKDDTV----SLVVPPTP
gm026307_Glyma0 ------SDHKP--LLPPPTPFILGKRIRPDDDSA--------AKDDAV----SLVAPPTP
                       *:**   *  .:*******:*.*:*.          **::.          :*

AT5G23280.1     AGFWAVPARPDFGQVWSF---AGAPQEMFLQQQ---------HHHQQPLFVHQQQQQQAA
gm054250_Glyma2 PGPGVVPAWPDFGQIWSFVAAAAAPEMVSVPQQQQQQASLFAHHHR--------QQQQLA
gm026305_Glyma0 PALWALPPRPDFGQVWSF---AAAPELVSVSPQN----SMFHHHHQH----HQQQQQQAA
gm053432_Glyma2 PSLWALPPRPDFGQVWSF----AAPELVSVSPQN----SLFHHHHHH----H---HQQAA
gm026307_Glyma0 PALWALPPRPDFGQVWSF---AAAPELVSVSPQN----SMFHHHHQH----HQQQQQQAA
                ..  .:*. *****:***    .**: : :  *         ***:         :** *

AT5G23280.1     MGEASAARVGNYLPGHLNLLASLS-GGSPGSDRREEDPR
gm054250_Glyma2 IGEALAARVGNYLPGHLNLLASLS-GGPGNSGRRDDEPR
gm026305_Glyma0 MGEASAARLGNYLPGHLNLLASLS-GGHGNSGRRDDEPR
gm053432_Glyma2 MGEASAARLGNYLPGHLNLLASLSGGGHGNSGRRDDEPR
gm026307_Glyma0 MGEASAARLGNYLPGHLNLLASLS-GGHGNSGRRDDEPR
                :*** ***:*************** **  .*.**:::**
BoxShade v3.31 C (beta, 970507) Output
AT5G23280.1     M S I N N N N N N N N N N N D G L M I S S N G A L I E Q Q - - - - - - - - P S V V V K K P P A K D R H S K V D G R G R R
gm054250_Glyma2    M S - - - - - - - - - - N S D G - - - T T N G A I T E A Q R Q Q Q Q Q G G K A L A V K K P P S K D R H S K V D G R G R R
gm026305_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm053432_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm026307_Glyma0    M S - - - - - - - - - - N S D G - - - A T N A - - - - - - - - - - - - - - - - - - - - K P P S K D R H S K V D G R G R R
 
AT5G23280.1     I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T A S V S I R G
gm054250_Glyma2    I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S V I A A T G T G T I P A S F S S V S L S - - -
gm026305_Glyma0    - - M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G S G T T P A S F S T V - - - - - -
gm053432_Glyma2    - - M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T V - - - - - -
gm026307_Glyma0    I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G S G T T P A S F S T V - - - - - -
 
AT5G23280.1     A T N S T S L D H K P T S L L G G T S P F I L G K R V R A D E D S N N S H N H S S V G K D E T F T T - - - - - - - - T P
gm054250_Glyma2    - S P S S T S D Y K P - - Q L L A P T P F I L G K R I R T D E D S S - - - - - - - - - K D E A V S V G P S L V G P Y A P
gm026305_Glyma0    - - - - - - S D H K P - - L L P P P T P F I L G K R I R P D D D S A - - - - - - - - A K D D A V - - - - S L V A P P T P
gm053432_Glyma2    - - - - - - S D H K P - - L L P P P T P F I L G K R I R P D D D N S - - - - - - - - A K D D T V - - - - S L V V P P T P
gm026307_Glyma0    - - - - - - S D H K P - - L L P P P T P F I L G K R I R P D D D S A - - - - - - - - A K D D A V - - - - S L V A P P T P
 
AT5G23280.1     A G F W A V P A R P D F G Q V W S F - - - A G A P Q E M F L Q Q Q - - - - - - - - - H H H Q Q P L F V H Q Q Q Q Q Q A A
gm054250_Glyma2    P G P G V V P A W P D F G Q I W S F V A A A A A P E M V S V P Q Q Q Q Q Q A S L F A H H H R - - - - - - - - Q Q Q Q L A
gm026305_Glyma0    P A L W A L P P R P D F G Q V W S F - - - A A A P E L V S V S P Q N - - - - S M F H H H H Q H - - - - H Q Q Q Q Q Q A A
gm053432_Glyma2    P S L W A L P P R P D F G Q V W S F - - - - A A P E L V S V S P Q N - - - - S L F H H H H H H - - - - H - - - H Q Q A A
gm026307_Glyma0    P A L W A L P P R P D F G Q V W S F - - - A A A P E L V S V S P Q N - - - - S M F H H H H Q H - - - - H Q Q Q Q Q Q A A
 
AT5G23280.1     M G E A S A A R V G N Y L P G H L N L L A S L S - G G S P G S D R R E E D P R
gm054250_Glyma2    I G E A L A A R V G N Y L P G H L N L L A S L S - G G P G N S G R R D D E P R
gm026305_Glyma0    M G E A S A A R L G N Y L P G H L N L L A S L S - G G H G N S G R R D D E P R
gm053432_Glyma2    M G E A S A A R L G N Y L P G H L N L L A S L S G G G H G N S G R R D D E P R
gm026307_Glyma0    M G E A S A A R L G N Y L P G H L N L L A S L S - G G H G N S G R R D D E P R
 
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