fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029164 not found in 246aa AT5G23280.1 1st_1st 0.638554216 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G23280.1     MSINNNNNNNNNNNDGLMISSNGALI--EQQPSVVVKKPPAKDRHSKVDGRGRRIRMPII
gm029164_Glyma1 MS------NSDATTNGV---SNGAIIDAQRQQALAVKKPPSKDRHSKVDGRGRRIRMPII
                **      *.: ..:*:   ****:*  ::* ::.*****:*******************

AT5G23280.1     CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATN---
gm029164_Glyma1 CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSSVSLSVRAAANSLS
                *************************************:********:.*:*:*.*:*   

AT5G23280.1     --STSLDHKPTSLLGGTSPFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWAVPAR
gm029164_Glyma1 SPSSTSDHKPQLL--SPTPFILGKRIRTDEDSSKDEA-VSVGPSLVGPSTPPGLWALPAR
                  *:: ****  *  ..:*******:*:****.:..   *** . . .:**.*:**:***

AT5G23280.1     PDFGQVWSF--AGAPQEMFLQQQHHHQQPLFV-HQQQQQQAAMGEASAARVGNYLPGHLN
gm029164_Glyma1 PDFGQIWSFAAAAAPEMVSVSQQ--QQASLFAHHHRQQQQQAIGEASAARVGNYLPGHLN
                *****:***  *.**: : :.**  :* .**. *::**** *:*****************

AT5G23280.1     LLASLSGGSPGSDRREEDPR
gm029164_Glyma1 LLASLSGGPGNSGRRDDEPR
                ********. .*.**:::**
BoxShade v3.31 C (beta, 970507) Output
AT5G23280.1     M S I N N N N N N N N N N N D G L M I S S N G A L I - - E Q Q P S V V V K K P P A K D R H S K V D G R G R R I R M P I I
gm029164_Glyma1    M S - - - - - - N S D A T T N G V - - - S N G A I I D A Q R Q Q A L A V K K P P S K D R H S K V D G R G R R I R M P I I
 
AT5G23280.1     C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T A S V S I R G A T N - - -
gm029164_Glyma1    C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G S G T T P A S F S S V S L S V R A A A N S L S
 
AT5G23280.1     - - S T S L D H K P T S L L G G T S P F I L G K R V R A D E D S N N S H N H S S V G K D E T F T T T P A G F W A V P A R
gm029164_Glyma1    S P S S T S D H K P Q L L - - S P T P F I L G K R I R T D E D S S K D E A - V S V G P S L V G P S T P P G L W A L P A R
 
AT5G23280.1     P D F G Q V W S F - - A G A P Q E M F L Q Q Q H H H Q Q P L F V - H Q Q Q Q Q Q A A M G E A S A A R V G N Y L P G H L N
gm029164_Glyma1    P D F G Q I W S F A A A A A P E M V S V S Q Q - - Q Q A S L F A H H H R Q Q Q Q Q A I G E A S A A R V G N Y L P G H L N
 
AT5G23280.1     L L A S L S G G S P G S D R R E E D P R
gm029164_Glyma1    L L A S L S G G P G N S G R R D D E P R
 
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