fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G23280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029164 not found in 246aa AT5G23280.1 1st_1st 0.638554216 Ia
Gm026307 not found in 208aa AT5G23280.1 not_1st 0.557228915 II
Gm054250 not found in 242aa AT5G23280.1 not_1st 0.533132530 II
Gm026305 not found in 179aa AT5G23280.1 not_1st 0.442771084 II
Gm053432 not found in 176aa AT5G23280.1 not_1st 0.421686746 II
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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G23280.1     MSINNNNNNNNNNNDGLMIS-SNGALIEQQ--------PSVVVKKPPAKDRHSKVDGRGR
gm029164_Glyma1 MS----------NSDATTNGVSNGAIIDAQRQQ------ALAVKKPPSKDRHSKVDGRGR
gm026307_Glyma0 MS----------NSDGATNA------------------------KPPSKDRHSKVDGRGR
gm053432_Glyma2 ------------------------------------------------------------
gm026305_Glyma0 ------------------------------------------------------------
gm054250_Glyma2 MS----------NSDGTT----NGAITEAQRQQQQQGGKALAVKKPPSKDRHSKVDGRGR
                                                                            

AT5G23280.1     RIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIR
gm029164_Glyma1 RIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSSVSLSVR
gm026307_Glyma0 RIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSTV-----
gm053432_Glyma2 ---MPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTV-----
gm026305_Glyma0 ---MPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSTV-----
gm054250_Glyma2 RIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSVIAATGTGTIPASFSSV-----
                   ***********************************:*****:** *****:.     

AT5G23280.1     GATNSTS-----LDHKPTSLLGGTSPFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAG
gm029164_Glyma1 AAANSLSSPSSTSDHKP--QLLSPTPFILGKRIRTDEDSS-KDEAVSVGPSLVGPSTPPG
gm026307_Glyma0 ------------SDHKP--LLPPPTPFILGKRIRPDDDSAAKDDAV----SLVAPPTPPA
gm053432_Glyma2 ------------SDHKP--LLPPPTPFILGKRIRPDDDNSAKDDTV----SLVVPPTPPS
gm026305_Glyma0 ------------SDHKP--LLPPPTPFILGKRIRPDDDSAAKDDAV----SLVAPPTPPA
gm054250_Glyma2 ----SLSSPSSTSDYKP--QLLAPTPFILGKRIRTDEDSS-KDEAVSVGPSLVGPYAPPG
                             *:**   *  .:*******:*.*:*.  ..:      . . . :*..

AT5G23280.1     FWAVPARPDFGQVWSF---AGAPQEMFL----QQQ-----HHHQQPLFVHQQQQQQAAMG
gm029164_Glyma1 LWALPARPDFGQIWSF-AAAAAPEMVSV--SQQQQASLFAHHHR--------QQQQQAIG
gm026307_Glyma0 LWALPPRPDFGQVWSF---AAAPELVSV----SPQNSMFHHHHQH----HQQQQQQAAMG
gm053432_Glyma2 LWALPPRPDFGQVWSF----AAPELVSV----SPQNSLFHHHHHH----H---HQQAAMG
gm026305_Glyma0 LWALPPRPDFGQVWSF---AAAPELVSV----SPQNSMFHHHHQH----HQQQQQQAAMG
gm054250_Glyma2 PGVVPAWPDFGQIWSFVAAAAAPEMVSVPQQQQQQASLFAHHHR--------QQQQLAIG
                  .:*. *****:***    .**: : :    . *     ***:         :** *:*

AT5G23280.1     EASAARVGNYLPGHLNLLASLS-GGSPGSDRREEDPR
gm029164_Glyma1 EASAARVGNYLPGHLNLLASLS-GGPGNSGRRDDEPR
gm026307_Glyma0 EASAARLGNYLPGHLNLLASLS-GGHGNSGRRDDEPR
gm053432_Glyma2 EASAARLGNYLPGHLNLLASLSGGGHGNSGRRDDEPR
gm026305_Glyma0 EASAARLGNYLPGHLNLLASLS-GGHGNSGRRDDEPR
gm054250_Glyma2 EALAARVGNYLPGHLNLLASLS-GGPGNSGRRDDEPR
                ** ***:*************** **  .*.**:::**
BoxShade v3.31 C (beta, 970507) Output
AT5G23280.1     M S I N N N N N N N N N N N D G L M I S - S N G A L I E Q Q - - - - - - - - P S V V V K K P P A K D R H S K V D G R G R
gm029164_Glyma1    M S - - - - - - - - - - N S D A T T N G V S N G A I I D A Q R Q Q - - - - - - A L A V K K P P S K D R H S K V D G R G R
gm026307_Glyma0    M S - - - - - - - - - - N S D G A T N A - - - - - - - - - - - - - - - - - - - - - - - - K P P S K D R H S K V D G R G R
gm053432_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm026305_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm054250_Glyma2    M S - - - - - - - - - - N S D G T T - - - - N G A I T E A Q R Q Q Q Q Q G G K A L A V K K P P S K D R H S K V D G R G R
 
AT5G23280.1     R I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T A S V S I R
gm029164_Glyma1    R I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G S G T T P A S F S S V S L S V R
gm026307_Glyma0    R I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G S G T T P A S F S T V - - - - -
gm053432_Glyma2    - - - M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G T G T T P A S F S T V - - - - -
gm026305_Glyma0    - - - M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S I I A A T G S G T T P A S F S T V - - - - -
gm054250_Glyma2    R I R M P I I C A A R V F Q L T R E L G H K S D G Q T I E W L L R Q A E P S V I A A T G T G T I P A S F S S V - - - - -
 
AT5G23280.1     G A T N S T S - - - - - L D H K P T S L L G G T S P F I L G K R V R A D E D S N N S H N H S S V G K D E T F T T T P A G
gm029164_Glyma1    A A A N S L S S P S S T S D H K P - - Q L L S P T P F I L G K R I R T D E D S S - K D E A V S V G P S L V G P S T P P G
gm026307_Glyma0    - - - - - - - - - - - - S D H K P - - L L P P P T P F I L G K R I R P D D D S A A K D D A V - - - - S L V A P P T P P A
gm053432_Glyma2    - - - - - - - - - - - - S D H K P - - L L P P P T P F I L G K R I R P D D D N S A K D D T V - - - - S L V V P P T P P S
gm026305_Glyma0    - - - - - - - - - - - - S D H K P - - L L P P P T P F I L G K R I R P D D D S A A K D D A V - - - - S L V A P P T P P A
gm054250_Glyma2    - - - - S L S S P S S T S D Y K P - - Q L L A P T P F I L G K R I R T D E D S S - K D E A V S V G P S L V G P Y A P P G
 
AT5G23280.1     F W A V P A R P D F G Q V W S F - - - A G A P Q E M F L - - - - Q Q Q - - - - - H H H Q Q P L F V H Q Q Q Q Q Q A A M G
gm029164_Glyma1    L W A L P A R P D F G Q I W S F - A A A A A P E M V S V - - S Q Q Q Q A S L F A H H H R - - - - - - - - Q Q Q Q Q A I G
gm026307_Glyma0    L W A L P P R P D F G Q V W S F - - - A A A P E L V S V - - - - S P Q N S M F H H H H Q H - - - - H Q Q Q Q Q Q A A M G
gm053432_Glyma2    L W A L P P R P D F G Q V W S F - - - - A A P E L V S V - - - - S P Q N S L F H H H H H H - - - - H - - - H Q Q A A M G
gm026305_Glyma0    L W A L P P R P D F G Q V W S F - - - A A A P E L V S V - - - - S P Q N S M F H H H H Q H - - - - H Q Q Q Q Q Q A A M G
gm054250_Glyma2    P G V V P A W P D F G Q I W S F V A A A A A P E M V S V P Q Q Q Q Q Q A S L F A H H H R - - - - - - - - Q Q Q Q L A I G
 
AT5G23280.1     E A S A A R V G N Y L P G H L N L L A S L S - G G S P G S D R R E E D P R
gm029164_Glyma1    E A S A A R V G N Y L P G H L N L L A S L S - G G P G N S G R R D D E P R
gm026307_Glyma0    E A S A A R L G N Y L P G H L N L L A S L S - G G H G N S G R R D D E P R
gm053432_Glyma2    E A S A A R L G N Y L P G H L N L L A S L S G G G H G N S G R R D D E P R
gm026305_Glyma0    E A S A A R L G N Y L P G H L N L L A S L S - G G H G N S G R R D D E P R
gm054250_Glyma2    E A L A A R V G N Y L P G H L N L L A S L S - G G P G N S G R R D D E P R
 
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