fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006952 not found in 300aa AT5G24800.1 1st_1st 0.385080645 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G24800.1     MDNHTA--KDIGMKRSASELA-------------LQEYLTTSPLDPCFDLMNRDYTC-EL
pt006952_POPTR_ MEEQKAGGSD-GMKKSESELADFSAEIYGFFSDIFSGDLSSFPVNKTRDIVNGFSTCGGL
                *:::.*  .* ***:* ****             :.  *:: *::   *::*   **  *

AT5G24800.1     RDS-LLWSEGLFPAGP----FRDAQSSICENLSADSPVSANKPEVRGGVRRTTSGSSHVN
pt006952_POPTR_ TESCFLWSQNTNPKNSSVSVSTDAQSSLC----VGSPMSANKPRVKDSQTRVAASVSSPD
                 :* :***:.  * ..      *****:*    ..**:*****.*:..  *.::. *  :

AT5G24800.1     SDDEDAETEAGQSEMTNDPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDN
pt006952_POPTR_ QSDED-----GLSEQSTNPHDIKRIRRMVSNRESARRSRKRKQAHLSDLEVQVDHMTGEN
                ..***     * ** :.:*:*:****** ******:***:*** :* ***.*** :.*:*

AT5G24800.1     STLYKQLIDATQQFRSAGTNNRVLKSDVETLRVKVKLAEDLVARGSLT-SSLNQLLQTHL
pt006952_POPTR_ ASLFKQLSDATQQFRTAETNRRVLNSDVEALRAKVKLAEDMVARGSLTCNNLNQFLQSHL
                ::*:*** *******:* **.***:****:**.*******:******* ..***:**:**

AT5G24800.1     SPP----SHSISSLHYTGNTSPAITVHSDQSLFPGMTLSGQNSSPGLGN-----------
pt006952_POPTR_ TSPQLLNNH---NLHLMPNVSPTITIQGDEA-YAGMSVSGQNSGLGLGSADISNGNLNNG
                :.*    .*   .**   *.**:**::.*:: :.**::*****. ***.           

AT5G24800.1     VSSEAVSCVSDIWP
pt006952_POPTR_ ILSDAASCITNIWS
                : *:*.**:::**.
BoxShade v3.31 C (beta, 970507) Output
AT5G24800.1     M D N H T A - - K D I G M K R S A S E L A - - - - - - - - - - - - - L Q E Y L T T S P L D P C F D L M N R D Y T C - E L
pt006952_POPTR_    M E E Q K A G G S D - G M K K S E S E L A D F S A E I Y G F F S D I F S G D L S S F P V N K T R D I V N G F S T C G G L
 
AT5G24800.1     R D S - L L W S E G L F P A G P - - - - F R D A Q S S I C E N L S A D S P V S A N K P E V R G G V R R T T S G S S H V N
pt006952_POPTR_    T E S C F L W S Q N T N P K N S S V S V S T D A Q S S L C - - - - V G S P M S A N K P R V K D S Q T R V A A S V S S P D
 
AT5G24800.1     S D D E D A E T E A G Q S E M T N D P N D L K R I R R M N S N R E S A K R S R R R K Q E Y L V D L E T Q V D S L K G D N
pt006952_POPTR_    Q S D E D - - - - - G L S E Q S T N P H D I K R I R R M V S N R E S A R R S R K R K Q A H L S D L E V Q V D H M T G E N
 
AT5G24800.1     S T L Y K Q L I D A T Q Q F R S A G T N N R V L K S D V E T L R V K V K L A E D L V A R G S L T - S S L N Q L L Q T H L
pt006952_POPTR_    A S L F K Q L S D A T Q Q F R T A E T N R R V L N S D V E A L R A K V K L A E D M V A R G S L T C N N L N Q F L Q S H L
 
AT5G24800.1     S P P - - - - S H S I S S L H Y T G N T S P A I T V H S D Q S L F P G M T L S G Q N S S P G L G N - - - - - - - - - - -
pt006952_POPTR_    T S P Q L L N N H - - - N L H L M P N V S P T I T I Q G D E A - Y A G M S V S G Q N S G L G L G S A D I S N G N L N N G
 
AT5G24800.1     V S S E A V S C V S D I W P
pt006952_POPTR_    I L S D A A S C I T N I W S
 
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