fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb034148 not found in 523aa AT5G24800.1 1st_1st 0.260080645 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G24800.1     --------------------------------------------------MDNHTAKDIG
Sb034148_Sorbi1 VPPDFCPRLHPLLQKPSAPHGTARRRATPPRRDGDGTGGAGAVGVNCRGTPGRQAGRQGG
                                                                   ..::.:: *

AT5G24800.1     MKRSASELALQEYLTTS-------------------PLDPCFDLMNRDYTCELRDSLLWS
Sb034148_Sorbi1 MKKCASELELEAFIRESGDDDARAAAAGRSNHGCGGPGEPG------------GSAVVFS
                **:.**** *: ::  *                   * :*              .::::*

AT5G24800.1     EGL-FPAGPFRDAQSSICENLSADSPVSANKPEVRGGVRRTTSGSSHVNSD-DEDAET--
Sb034148_Sorbi1 PGVGFAESNTMDDSSWWYGSVRTPNPVMSRTASISASLEATTSANHALESESDSDSESLY
                 *: *. .   * .*    .: : .** :....: ..:. ***..  ::*: *.*:*:  

AT5G24800.1     --EAGQSEMTNDPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQ
Sb034148_Sorbi1 EVEGVPYERGNKSVETKRIRRMVSNRESARRSRRRKQAQLSELESQVERLKGENATLFQR
                  *.   *  *.. : ****** ******:*******  * :**:**: ***:*:**:::

AT5G24800.1     LIDATQQFRSAGTNNRVLKSDVETLRVKVKLAEDLVARGSLTSSLNQL-LQTHLSPPS--
Sb034148_Sorbi1 LSEANQQFSTAVTDNRILKSDVEALRVKVKMAEDMVARSAISCGLGDLGLAPYLNSRKMC
                * :*.*** :* *:**:******:******:***:***.:::..*.:* * .:*.. .  

AT5G24800.1     HSISSLHYTG------------NTSPAITVHSDQSLFPGMTLSGQNSSPGLGN-VSSEAV
Sb034148_Sorbi1 QALNMLTTTGLDLLGSDAFRGPTTAPQVQNSPVQS-----TASLEN----LDNRKSNEVT
                :::. *  **            .*:* :   . **     * * :*    *.*  *.*..

AT5G24800.1     SCVSDIWP
Sb034148_Sorbi1 SCAADIWP
                **.:****
BoxShade v3.31 C (beta, 970507) Output
AT5G24800.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D N H T A K D I G
Sb034148_Sorbi1    V P P D F C P R L H P L L Q K P S A P H G T A R R R A T P P R R D G D G T G G A G A V G V N C R G T P G R Q A G R Q G G
 
AT5G24800.1     M K R S A S E L A L Q E Y L T T S - - - - - - - - - - - - - - - - - - - P L D P C F D L M N R D Y T C E L R D S L L W S
Sb034148_Sorbi1    M K K C A S E L E L E A F I R E S G D D D A R A A A A G R S N H G C G G P G E P G - - - - - - - - - - - - G S A V V F S
 
AT5G24800.1     E G L - F P A G P F R D A Q S S I C E N L S A D S P V S A N K P E V R G G V R R T T S G S S H V N S D - D E D A E T - -
Sb034148_Sorbi1    P G V G F A E S N T M D D S S W W Y G S V R T P N P V M S R T A S I S A S L E A T T S A N H A L E S E S D S D S E S L Y
 
AT5G24800.1     - - E A G Q S E M T N D P N D L K R I R R M N S N R E S A K R S R R R K Q E Y L V D L E T Q V D S L K G D N S T L Y K Q
Sb034148_Sorbi1    E V E G V P Y E R G N K S V E T K R I R R M V S N R E S A R R S R R R K Q A Q L S E L E S Q V E R L K G E N A T L F Q R
 
AT5G24800.1     L I D A T Q Q F R S A G T N N R V L K S D V E T L R V K V K L A E D L V A R G S L T S S L N Q L - L Q T H L S P P S - -
Sb034148_Sorbi1    L S E A N Q Q F S T A V T D N R I L K S D V E A L R V K V K M A E D M V A R S A I S C G L G D L G L A P Y L N S R K M C
 
AT5G24800.1     H S I S S L H Y T G - - - - - - - - - - - - N T S P A I T V H S D Q S L F P G M T L S G Q N S S P G L G N - V S S E A V
Sb034148_Sorbi1    Q A L N M L T T T G L D L L G S D A F R G P T T A P Q V Q N S P V Q S - - - - - T A S L E N - - - - L D N R K S N E V T
 
AT5G24800.1     S C V S D I W P
Sb034148_Sorbi1    S C A A D I W P
 
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