fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009045 not found in 309aa AT5G24930.1 not_1st 0.460856720 II
Pt008332 not found in 350aa AT5G24930.1 not_1st 0.528803545 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G24930.1     MDPTWIDSLTRSCEANSNTNHKRKRERETLKHREKKKKRFRERKMASKLCDSCKSATAAL
gm009045_Glyma0 --------------------------------------------MASKLCDSCKSATATL
pt008332_POPTR_ --------------------------------------------MASKLCDSCKSATATL
                                                            **************:*

AT5G24930.1     YCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDI
gm009045_Glyma0 YCRPDAAFLCGACDSKVHAANKLASRHPRVALCEVCEQAPAHVTCKADAAALCLACDRDI
pt008332_POPTR_ FCRADSAFLCISCDSKIHAANKLASRHARVSVCEVCEQAPAHFTCKADAAALCVTCDRDI
                :**.*:**** :****:**********.** :**********.**********::*****

AT5G24930.1     HSANPLARRHERVPVTPFYDSVSSDGSVK--HTAVNFLDD-CYFSDIDGN-GSREEEEEE
gm009045_Glyma0 HSANPLASRHERIPVSPFFESVH---SVK-ASSPINFLDDHRFFSDAD---ADVSTEEAE
pt008332_POPTR_ HSANPLASRHERVPITPFFDSSS---TVHGGGEAVNLLED-RYFDEVDGGRGDVSREEAE
                ******* ****:*::**::*     :*:    .:*:*:*  :*.: *   .. . ** *

AT5G24930.1     AASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLF--SDPDPYLDLDYGNV
gm009045_Glyma0 AASW-LLPNP----------------------KTDLNSS-QYLFSETEPVPYIDLDYAAV
pt008332_POPTR_ AESW-LLPNPGGGT--TKGV-----------DSMDLNTG-QYVFG-SEMDPYLDLD-PYV
                * ** *****                      . ::*:. **:*  ::  **:***   *

AT5G24930.1     DPKVESLEQNSSGT-DGVVPVENRTVRIPT---VNEN-CFEMDFTGGSKGFTYGGGYNC-
gm009045_Glyma0 DPKA---EQKSSATADGVVPVQSN---FE--------------------PFAYGYKYNTT
pt008332_POPTR_ DPKVEVQEQNSSGTTDGVVPVQSNKLGFQSPALVNDHCCYELDFSTGSKSFGGGYGYNS-
                ***.   **:**.* ******:..   :                      *  *  **  

AT5G24930.1     -----ISHSVSSSSMEVGVVPD--GGSVADVSYPYGGPATSGADPGTQRAVPLTSAEREA
gm009045_Glyma0 LSQSQMSQSVSSSSMEVGVVPD--GNTMSETSN--CSYSKVPPV-TVTVTAQFSAADREA
pt008332_POPTR_ -----LSQSVSSSSLDVGVVPDGSGSTLTDISNPYCSRSVCNGMESANQTVQLSAVDREA
                     :*:******::******  *.:::: *    . :       .  :. :::.:***

AT5G24930.1     RVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGFG
gm009045_Glyma0 RVLRYREKRKNRKFEKTIRYASRKAYAEARPRIKGRFAKRTDPD----------PLAGYG
pt008332_POPTR_ RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEVEVD----RSSLYGFG
                **:************************* *************.:           : *:*

AT5G24930.1     LVPTF
gm009045_Glyma0 VVPSC
pt008332_POPTR_ VVPSF
                :**:
BoxShade v3.31 C (beta, 970507) Output
AT5G24930.1     M D P T W I D S L T R S C E A N S N T N H K R K R E R E T L K H R E K K K K R F R E R K M A S K L C D S C K S A T A A L
gm009045_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S K L C D S C K S A T A T L
pt008332_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S K L C D S C K S A T A T L
 
AT5G24930.1     Y C R P D A A F L C L S C D S K V H A A N K L A S R H A R V W M C E V C E Q A P A H V T C K A D A A A L C V T C D R D I
gm009045_Glyma0    Y C R P D A A F L C G A C D S K V H A A N K L A S R H P R V A L C E V C E Q A P A H V T C K A D A A A L C L A C D R D I
pt008332_POPTR_    F C R A D S A F L C I S C D S K I H A A N K L A S R H A R V S V C E V C E Q A P A H F T C K A D A A A L C V T C D R D I
 
AT5G24930.1     H S A N P L A R R H E R V P V T P F Y D S V S S D G S V K - - H T A V N F L D D - C Y F S D I D G N - G S R E E E E E E
gm009045_Glyma0    H S A N P L A S R H E R I P V S P F F E S V H - - - S V K - A S S P I N F L D D H R F F S D A D - - - A D V S T E E A E
pt008332_POPTR_    H S A N P L A S R H E R V P I T P F F D S S S - - - T V H G G G E A V N L L E D - R Y F D E V D G G R G D V S R E E A E
 
AT5G24930.1     A A S W L L L P N P K T T T T A T A G I V A V T S A E E V P G D S P E M N T G Q Q Y L F - - S D P D P Y L D L D Y G N V
gm009045_Glyma0    A A S W - L L P N P - - - - - - - - - - - - - - - - - - - - - - K T D L N S S - Q Y L F S E T E P V P Y I D L D Y A A V
pt008332_POPTR_    A E S W - L L P N P G G G T - - T K G V - - - - - - - - - - - D S M D L N T G - Q Y V F G - S E M D P Y L D L D - P Y V
 
AT5G24930.1     D P K V E S L E Q N S S G T - D G V V P V E N R T V R I P T - - - V N E N - C F E M D F T G G S K G F T Y G G G Y N C -
gm009045_Glyma0    D P K A - - - E Q K S S A T A D G V V P V Q S N - - - F E - - - - - - - - - - - - - - - - - - - - P F A Y G Y K Y N T T
pt008332_POPTR_    D P K V E V Q E Q N S S G T T D G V V P V Q S N K L G F Q S P A L V N D H C C Y E L D F S T G S K S F G G G Y G Y N S -
 
AT5G24930.1     - - - - - I S H S V S S S S M E V G V V P D - - G G S V A D V S Y P Y G G P A T S G A D P G T Q R A V P L T S A E R E A
gm009045_Glyma0    L S Q S Q M S Q S V S S S S M E V G V V P D - - G N T M S E T S N - - C S Y S K V P P V - T V T V T A Q F S A A D R E A
pt008332_POPTR_    - - - - - L S Q S V S S S S L D V G V V P D G S G S T L T D I S N P Y C S R S V C N G M E S A N Q T V Q L S A V D R E A
 
AT5G24930.1     R V M R Y R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D T N E S N D V V G H G G I F S G F G
gm009045_Glyma0    R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E A R P R I K G R F A K R T D P D - - - - - - - - - - P L A G Y G
pt008332_POPTR_    R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E T R P R I K G R F A K R T D T E V E V D - - - - R S S L Y G F G
 
AT5G24930.1     L V P T F
gm009045_Glyma0    V V P S C
pt008332_POPTR_    V V P S F
 
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