fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014239 not found in 310aa AT5G24930.1 1st_1st 0.460856720 Ia
Pt007090 not found in 348aa AT5G24930.1 1st_1st 0.536189069 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G24930.1     MDPTWIDSLTRSCEANSNTNHKRKRERETLKHREKKKKRFRERKMASKLCDSCKSATAAL
pt007090_POPTR_ --------------------------------------------MASKLCDSCKSATATL
gm014239_Glyma0 --------------------------------------------MASKLCDSCKSATATL
                                                            **************:*

AT5G24930.1     YCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDI
pt007090_POPTR_ FCRADSAFLCVSCDSKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDI
gm014239_Glyma0 YCRPDAAFLCGACDSKVHAANKLASRHPRVVLCEVCEQAPAHVTCKADAAALCLACDRDI
                :**.*:**** :****:**********.** :*********************::*****

AT5G24930.1     HSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFSDIDGNGSREEEEEEAASW
pt007090_POPTR_ HSANPLAQRHERVPVTPFFDSSSAAHG-GGAAVNFLEYRYLDDVNGGDDVSREEAEAESW
gm014239_Glyma0 HSANPLASRHERIPVTPFFESVHSVK--ASSPINF-HHRFFSDADADADVSTEEAEAASW
                ******* ****:*****::*  :      :.:** .  ::.* :.. . . ** ** **

AT5G24930.1     LLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLFS--DPDPYLDLDYGNVDPKV
pt007090_POPTR_ -LLPNPGGGN--TKGV-----------DSLDLNTG-QYVFG-AEMHPYLDLD-RYVDQKV
gm014239_Glyma0 -LLPNP----------------------KTDLNSS-QYLFSETEPVPYIDLDYAAMDPKT
                 *****                      . ::*:. **:*.  :  **:***   :* *.

AT5G24930.1     --ESLEQNSSGT-DGVVPVENRTV--RIPT-VNENC-FEMDFTGGSKGFTYGGGYNC---
pt007090_POPTR_ EVEVQEQNSSGTTDGVVPVQSNKLGFQAPALVNDNCCFELDFSAGSKTFAGGYGYNS---
gm014239_Glyma0 -----EQKSSATADGVVPVQSN---------------FE--------PFTYGYKYNTTLS
                     **:**.* ******:..               **         *: *  **    

AT5G24930.1     -----ISHSVSS-SSMEVGVVPDGGSVADVSY-PYGGPATSGADPGTQRAVPLTSAEREA
pt007090_POPTR_ -----LSHSVSS-SSLDVGVVPDGSTLTDISN-PYSRSVSNGMESANQ-TVQLSAVDREA
gm014239_Glyma0 QSQSHMSQSVSSPSSMEVGVVPDGNTMSEISNCSYSK-----VAPVTV-TAQFSAADREA
                     :*:**** **::*******.:::::*  .*.        . .  :. :::.:***

AT5G24930.1     RVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGFG
pt007090_POPTR_ RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDSGVEVD----RSSIYGFG
gm014239_Glyma0 RVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDA----------DPLAGYG
                **:************************* *************:          . : *:*

AT5G24930.1     LVPTF
pt007090_POPTR_ VVPSF
gm014239_Glyma0 VVPSC
                :**:
BoxShade v3.31 C (beta, 970507) Output
AT5G24930.1     M D P T W I D S L T R S C E A N S N T N H K R K R E R E T L K H R E K K K K R F R E R K M A S K L C D S C K S A T A A L
pt007090_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S K L C D S C K S A T A T L
gm014239_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S K L C D S C K S A T A T L
 
AT5G24930.1     Y C R P D A A F L C L S C D S K V H A A N K L A S R H A R V W M C E V C E Q A P A H V T C K A D A A A L C V T C D R D I
pt007090_POPTR_    F C R A D S A F L C V S C D S K I H A A N K L A S R H A R V W V C E V C E Q A P A H V T C K A D A A A L C V T C D R D I
gm014239_Glyma0    Y C R P D A A F L C G A C D S K V H A A N K L A S R H P R V V L C E V C E Q A P A H V T C K A D A A A L C L A C D R D I
 
AT5G24930.1     H S A N P L A R R H E R V P V T P F Y D S V S S D G S V K H T A V N F L D D C Y F S D I D G N G S R E E E E E E A A S W
pt007090_POPTR_    H S A N P L A Q R H E R V P V T P F F D S S S A A H G - G G A A V N F L E Y R Y L D D V N G G D D V S R E E A E A E S W
gm014239_Glyma0    H S A N P L A S R H E R I P V T P F F E S V H S V K - - A S S P I N F - H H R F F S D A D A D A D V S T E E A E A A S W
 
AT5G24930.1     L L L P N P K T T T T A T A G I V A V T S A E E V P G D S P E M N T G Q Q Y L F S - - D P D P Y L D L D Y G N V D P K V
pt007090_POPTR_    - L L P N P G G G N - - T K G V - - - - - - - - - - - D S L D L N T G - Q Y V F G - A E M H P Y L D L D - R Y V D Q K V
gm014239_Glyma0    - L L P N P - - - - - - - - - - - - - - - - - - - - - - K T D L N S S - Q Y L F S E T E P V P Y I D L D Y A A M D P K T
 
AT5G24930.1     - - E S L E Q N S S G T - D G V V P V E N R T V - - R I P T - V N E N C - F E M D F T G G S K G F T Y G G G Y N C - - -
pt007090_POPTR_    E V E V Q E Q N S S G T T D G V V P V Q S N K L G F Q A P A L V N D N C C F E L D F S A G S K T F A G G Y G Y N S - - -
gm014239_Glyma0    - - - - - E Q K S S A T A D G V V P V Q S N - - - - - - - - - - - - - - - F E - - - - - - - - P F T Y G Y K Y N T T L S
 
AT5G24930.1     - - - - - I S H S V S S - S S M E V G V V P D G G S V A D V S Y - P Y G G P A T S G A D P G T Q R A V P L T S A E R E A
pt007090_POPTR_    - - - - - L S H S V S S - S S L D V G V V P D G S T L T D I S N - P Y S R S V S N G M E S A N Q - T V Q L S A V D R E A
gm014239_Glyma0    Q S Q S H M S Q S V S S P S S M E V G V V P D G N T M S E I S N C S Y S K - - - - - V A P V T V - T A Q F S A A D R E A
 
AT5G24930.1     R V M R Y R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D T N E S N D V V G H G G I F S G F G
pt007090_POPTR_    R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E T R P R I K G R F A K R T D S G V E V D - - - - R S S I Y G F G
gm014239_Glyma0    R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E T R P R I K G R F A K R T D A - - - - - - - - - - D P L A G Y G
 
AT5G24930.1     L V P T F
pt007090_POPTR_    V V P S F
gm014239_Glyma0    V V P S C
 
0