fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028750 not found in 358aa AT5G24930.1 1st_1st 0.373707533 Ib
Sm002074 not found in 509aa AT5G24930.1 1st_1st 0.381093057 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G24930.1     MDPTWIDSLTRSCEANSNTNHKRK-------RERETLKHREKKKK---------------
Sm002074_Selmo1 ------------------LNGTRQISWFFGSRSRIPAKYRRIDRQILASTAISIESTDIS
pp028750_Pp1s37 ------------------------------------------------------------
                                                                            

AT5G24930.1     --------RFRER--KMASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHA
Sm002074_Selmo1 AKSCGIDGHFHESIDPAMTKPCDACQSGNAVIYCRADAAFLCCSCDNKVHCANKLASRHE
pp028750_Pp1s37 -----------------MPKPCDACHVSSAAVFCRADAAYLCVGCDGKVHGANKLASRHE
                                  .* **:*: ..*.::**.***:** .**.*** ******** 

AT5G24930.1     RVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDS-------
Sm002074_Selmo1 RVLVCEVCEHAPAAVTCKADAAALCVTCDSDIHSANPLARRHERVPITPFVDSSDGGAAP
pp028750_Pp1s37 RVWMCEVCEVAPAVVTCKADAASLCVACDTDIHSANPLAQRHERVPVTPLFES----ASP
                ** :***** *** ********:***:** *********:******:**: :*       

AT5G24930.1     -------VSSDGSVKHTAVNFLDDCYFSDIDGNGSREEEEEEAASWLLLPNPKTT-----
Sm002074_Selmo1 PPAPPI-LHDTGNANHD----------------DEEESSAAEAASW-LLPQP----NNLA
pp028750_Pp1s37 LRGPDFCVLVSENGCHDLL-------------KGCEDASVVEAVSW-LLPHPKISTNSII
                       :    .  *                 . .: .  **.** ***:*        

AT5G24930.1     ---TTATAGIVAVTSAEE--VPGDSPEMN----------TGQQYLFSDPDPYLDLDYGNV
Sm002074_Selmo1 KSDGEKLGGGVESTDFYSTLKPSAPPPLRIEKLLLKSQAAANFDLFSDEDSYLDMDFLGA
pp028750_Pp1s37 R--GSAAADEMGSSPFHD--RPFSPKPKK-QKVELPA------DIFSDVDPFLDLDDATV
                       .. :  :   .   *  .   .               :*** *.:**:*   .

AT5G24930.1     DPKVESLEQNSSGTDGVVPVENRTVRIPT-----------VNENCFEMDFTGGSKGFTYG
Sm002074_Selmo1 ---------LHSVTDSLVPIHT------TGGALHSSSPVGSNADSYDLDVHDKSPPHAYC
pp028750_Pp1s37 ---------TGIQPDSLVPVHMPECSEDTDSLAHSMDP---SFTKFPL-----SAKSGYS
                             .*.:**:.       *            .   : :     *    * 

AT5G24930.1     GGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATS-GADPGTQRAV----------
Sm002074_Selmo1 PGL-----SLSASSIDVGVVPD-ASLSDISTPQSRPTSSSVFGSGEAQAAAAPLHHAT--
pp028750_Pp1s37 YGTSTLTQSISCSSLDAAVVPD-SSLSDISTP--------YLDSQSSQDMSARLPHQTGG
                 *      *:*.**::..**** .*::*:* *          ..   :            

AT5G24930.1     PLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVG
Sm002074_Selmo1 PLEPIAREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRGEMD-------
pp028750_Pp1s37 PIDTVDREARVLRYKEKRQKRKFEKTIRYASRKAYAESRPRIKGRFAKRTDSDMEQ----
                *: .  *****:**:***::***************** *********** : :       

AT5G24930.1     HGGIFSGFGLVPTF
Sm002074_Selmo1 --SYDASFGVVPSF
pp028750_Pp1s37 FGSVDSSFGVVPSF
                  .  :.**:**:*
BoxShade v3.31 C (beta, 970507) Output
AT5G24930.1     M D P T W I D S L T R S C E A N S N T N H K R K - - - - - - - R E R E T L K H R E K K K K - - - - - - - - - - - - - - -
Sm002074_Selmo1    - - - - - - - - - - - - - - - - - - L N G T R Q I S W F F G S R S R I P A K Y R R I D R Q I L A S T A I S I E S T D I S
pp028750_Pp1s37    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G24930.1     - - - - - - - - R F R E R - - K M A S K L C D S C K S A T A A L Y C R P D A A F L C L S C D S K V H A A N K L A S R H A
Sm002074_Selmo1    A K S C G I D G H F H E S I D P A M T K P C D A C Q S G N A V I Y C R A D A A F L C C S C D N K V H C A N K L A S R H E
pp028750_Pp1s37    - - - - - - - - - - - - - - - - - M P K P C D A C H V S S A A V F C R A D A A Y L C V G C D G K V H G A N K L A S R H E
 
AT5G24930.1     R V W M C E V C E Q A P A H V T C K A D A A A L C V T C D R D I H S A N P L A R R H E R V P V T P F Y D S - - - - - - -
Sm002074_Selmo1    R V L V C E V C E H A P A A V T C K A D A A A L C V T C D S D I H S A N P L A R R H E R V P I T P F V D S S D G G A A P
pp028750_Pp1s37    R V W M C E V C E V A P A V V T C K A D A A S L C V A C D T D I H S A N P L A Q R H E R V P V T P L F E S - - - - A S P
 
AT5G24930.1     - - - - - - - V S S D G S V K H T A V N F L D D C Y F S D I D G N G S R E E E E E E A A S W L L L P N P K T T - - - - -
Sm002074_Selmo1    P P A P P I - L H D T G N A N H D - - - - - - - - - - - - - - - - D E E E S S A A E A A S W - L L P Q P - - - - N N L A
pp028750_Pp1s37    L R G P D F C V L V S E N G C H D L L - - - - - - - - - - - - - K G C E D A S V V E A V S W - L L P H P K I S T N S I I
 
AT5G24930.1     - - - T T A T A G I V A V T S A E E - - V P G D S P E M N - - - - - - - - - - T G Q Q Y L F S D P D P Y L D L D Y G N V
Sm002074_Selmo1    K S D G E K L G G G V E S T D F Y S T L K P S A P P P L R I E K L L L K S Q A A A N F D L F S D E D S Y L D M D F L G A
pp028750_Pp1s37    R - - G S A A A D E M G S S P F H D - - R P F S P K P K K - Q K V E L P A - - - - - - D I F S D V D P F L D L D D A T V
 
AT5G24930.1     D P K V E S L E Q N S S G T D G V V P V E N R T V R I P T - - - - - - - - - - - V N E N C F E M D F T G G S K G F T Y G
Sm002074_Selmo1    - - - - - - - - - L H S V T D S L V P I H T - - - - - - T G G A L H S S S P V G S N A D S Y D L D V H D K S P P H A Y C
pp028750_Pp1s37    - - - - - - - - - T G I Q P D S L V P V H M P E C S E D T D S L A H S M D P - - - S F T K F P L - - - - - S A K S G Y S
 
AT5G24930.1     G G Y N C I S H S V S S S S M E V G V V P D G G S V A D V S Y P Y G G P A T S - G A D P G T Q R A V - - - - - - - - - -
Sm002074_Selmo1    P G L - - - - - S L S A S S I D V G V V P D - A S L S D I S T P Q S R P T S S S V F G S G E A Q A A A A P L H H A T - -
pp028750_Pp1s37    Y G T S T L T Q S I S C S S L D A A V V P D - S S L S D I S T P - - - - - - - - Y L D S Q S S Q D M S A R L P H Q T G G
 
AT5G24930.1     P L T S A E R E A R V M R Y R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D T N E S N D V V G
Sm002074_Selmo1    P L E P I A R E A R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E T R P R I K G R F A K R G E M D - - - - - - -
pp028750_Pp1s37    P I D T V D R E A R V L R Y K E K R Q K R K F E K T I R Y A S R K A Y A E S R P R I K G R F A K R T D S D M E Q - - - -
 
AT5G24930.1     H G G I F S G F G L V P T F
Sm002074_Selmo1    - - S Y D A S F G V V P S F
pp028750_Pp1s37    F G S V D S S F G V V P S F
 
0