fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028750 not found in 358aa AT5G24930.1 1st_1st 0.373707533 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G24930.1     MDPTWIDSLTRSCEANSNTNHKRKRERETLKHREKKKKRFRERKMASKLCDSCKSATAAL
pp028750_Pp1s37 ---------------------------------------------MPKPCDACHVSSAAV
                                                              .* **:*: ::**:

AT5G24930.1     YCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDI
pp028750_Pp1s37 FCRADAAYLCVGCDGKVHGANKLASRHERVWMCEVCEVAPAVVTCKADAASLCVACDTDI
                :**.***:**:.**.***.******** ********* *** ********:***:** **

AT5G24930.1     HSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFSDIDG-----NGSREEEEE
pp028750_Pp1s37 HSANPLAQRHERVPVTPLFESASP--------LRGPDFCVLVSENGCHDLLKGCEDASVV
                *******:*********:::*.*.        :.  * * : . :*     :*..: .  

AT5G24930.1     EAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSP---------------EMNTGQQYLF
pp028750_Pp1s37 EAVSW-LLPHPKISTNS---IIRGSAAADEMGSSPFHDRPFSPKPKKQKVELPAD---IF
                **.** ***:** :*.:   *:  ::* :  *.**               *: :.   :*

AT5G24930.1     SDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTVNEN----CFEMD--FT
pp028750_Pp1s37 SDVDPFLDLD----DATVTGIQ-----PDSLVPVH-----MPECSEDTDSLAHSMDPSFT
                ** **:****    *..* .::     .*.:***.     :*  .*:    ...**  **

AT5G24930.1     ----GGSKGFTYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATS---GADPG
pp028750_Pp1s37 KFPLSAKSGYSYGT--STLTQSISCSSLDAAVVPD-SSLSDISTPYLDSQSSQDMSARLP
                    ....*::**   . :::*:*.**::..**** .*::*:* ** .. :*   .*   

AT5G24930.1     TQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNES
pp028750_Pp1s37 HQTGGPIDTVDREARVLRYKEKRQKRKFEKTIRYASRKAYAESRPRIKGRFAKRTDS---
                 * . *: :.:*****:**:***::***************** *************:   

AT5G24930.1     NDVVGHGGIFSGFGLVPTF
pp028750_Pp1s37 -DMEQFGSVDSSFGVVPSF
                 *:  .*.: *.**:**:*
BoxShade v3.31 C (beta, 970507) Output
AT5G24930.1     M D P T W I D S L T R S C E A N S N T N H K R K R E R E T L K H R E K K K K R F R E R K M A S K L C D S C K S A T A A L
pp028750_Pp1s37    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M P K P C D A C H V S S A A V
 
AT5G24930.1     Y C R P D A A F L C L S C D S K V H A A N K L A S R H A R V W M C E V C E Q A P A H V T C K A D A A A L C V T C D R D I
pp028750_Pp1s37    F C R A D A A Y L C V G C D G K V H G A N K L A S R H E R V W M C E V C E V A P A V V T C K A D A A S L C V A C D T D I
 
AT5G24930.1     H S A N P L A R R H E R V P V T P F Y D S V S S D G S V K H T A V N F L D D C Y F S D I D G - - - - - N G S R E E E E E
pp028750_Pp1s37    H S A N P L A Q R H E R V P V T P L F E S A S P - - - - - - - - L R G P D F C V L V S E N G C H D L L K G C E D A S V V
 
AT5G24930.1     E A A S W L L L P N P K T T T T A T A G I V A V T S A E E V P G D S P - - - - - - - - - - - - - - - E M N T G Q Q Y L F
pp028750_Pp1s37    E A V S W - L L P H P K I S T N S - - - I I R G S A A A D E M G S S P F H D R P F S P K P K K Q K V E L P A D - - - I F
 
AT5G24930.1     S D P D P Y L D L D Y G N V D P K V E S L E Q N S S G T D G V V P V E N R T V R I P T V N E N - - - - C F E M D - - F T
pp028750_Pp1s37    S D V D P F L D L D - - - - D A T V T G I Q - - - - - P D S L V P V H - - - - - M P E C S E D T D S L A H S M D P S F T
 
AT5G24930.1     - - - - G G S K G F T Y G G G Y N C I S H S V S S S S M E V G V V P D G G S V A D V S Y P Y G G P A T S - - - G A D P G
pp028750_Pp1s37    K F P L S A K S G Y S Y G T - - S T L T Q S I S C S S L D A A V V P D - S S L S D I S T P Y L D S Q S S Q D M S A R L P
 
AT5G24930.1     T Q R A V P L T S A E R E A R V M R Y R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D T N E S
pp028750_Pp1s37    H Q T G G P I D T V D R E A R V L R Y K E K R Q K R K F E K T I R Y A S R K A Y A E S R P R I K G R F A K R T D S - - -
 
AT5G24930.1     N D V V G H G G I F S G F G L V P T F
pp028750_Pp1s37    - D M E Q F G S V D S S F G V V P S F
 
0