fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008332 not found in 350aa AT5G24930.1 not_1st 0.528803545 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G24930.1     MDPTWIDSLTRSCEANSNTNHKRKRERETLKHREKKKKRFRERKMASKLCDSCKSATAAL
pt008332_POPTR_ --------------------------------------------MASKLCDSCKSATATL
                                                            **************:*

AT5G24930.1     YCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDI
pt008332_POPTR_ FCRADSAFLCISCDSKIHAANKLASRHARVSVCEVCEQAPAHFTCKADAAALCVTCDRDI
                :**.*:****:*****:************* :**********.*****************

AT5G24930.1     HSANPLARRHERVPVTPFYDSVSSDGSVKH---TAVNFLDDCYFSDIDGN-GSREEEEEE
pt008332_POPTR_ HSANPLASRHERVPITPFFDSSST----VHGGGEAVNLLEDRYFDEVDGGRGDVSREEAE
                ******* ******:***:** *:     *    ***:*:* **.::**. *. ..** *

AT5G24930.1     AASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLFSDPDPYLDLD-YGNVD
pt008332_POPTR_ AESW-LLPNPGGGT--TKGV-----------DSMDLNTGQYVFGSEMDPYLDLDPY--VD
                * ** *****   *  * *:           ** ::****  : *: ******* *  **

AT5G24930.1     PKVESLEQNSSG-TDGVVPVENRTVRIPT---VNEN-CFEMDFTGGSKGFTYGGGYNCIS
pt008332_POPTR_ PKVEVQEQNSSGTTDGVVPVQSNKLGFQSPALVNDHCCYELDFSTGSKSFGGGYGYNSLS
                ****  ****** *******:...: : :   **:: *:*:**: ***.*  * ***.:*

AT5G24930.1     HSVSSSSMEVGVVPD--GGSVADVSYPYGGPATSGADPGTQRAVPLTSAEREARVMRYRE
pt008332_POPTR_ QSVSSSSLDVGVVPDGSGSTLTDISNPYCSRSVCNGMESANQTVQLSAVDREARVLRYRE
                :******::******  *.:::*:* ** . :....  .::::* *::.:*****:****

AT5G24930.1     KRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGFGLVPTF
pt008332_POPTR_ KRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEVEVDRSS----LYGFGVVPSF
                ********************* **************: . *  .    : ***:**:*
BoxShade v3.31 C (beta, 970507) Output
AT5G24930.1     M D P T W I D S L T R S C E A N S N T N H K R K R E R E T L K H R E K K K K R F R E R K M A S K L C D S C K S A T A A L
pt008332_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S K L C D S C K S A T A T L
 
AT5G24930.1     Y C R P D A A F L C L S C D S K V H A A N K L A S R H A R V W M C E V C E Q A P A H V T C K A D A A A L C V T C D R D I
pt008332_POPTR_    F C R A D S A F L C I S C D S K I H A A N K L A S R H A R V S V C E V C E Q A P A H F T C K A D A A A L C V T C D R D I
 
AT5G24930.1     H S A N P L A R R H E R V P V T P F Y D S V S S D G S V K H - - - T A V N F L D D C Y F S D I D G N - G S R E E E E E E
pt008332_POPTR_    H S A N P L A S R H E R V P I T P F F D S S S T - - - - V H G G G E A V N L L E D R Y F D E V D G G R G D V S R E E A E
 
AT5G24930.1     A A S W L L L P N P K T T T T A T A G I V A V T S A E E V P G D S P E M N T G Q Q Y L F S D P D P Y L D L D - Y G N V D
pt008332_POPTR_    A E S W - L L P N P G G G T - - T K G V - - - - - - - - - - - D S M D L N T G Q Y V F G S E M D P Y L D L D P Y - - V D
 
AT5G24930.1     P K V E S L E Q N S S G - T D G V V P V E N R T V R I P T - - - V N E N - C F E M D F T G G S K G F T Y G G G Y N C I S
pt008332_POPTR_    P K V E V Q E Q N S S G T T D G V V P V Q S N K L G F Q S P A L V N D H C C Y E L D F S T G S K S F G G G Y G Y N S L S
 
AT5G24930.1     H S V S S S S M E V G V V P D - - G G S V A D V S Y P Y G G P A T S G A D P G T Q R A V P L T S A E R E A R V M R Y R E
pt008332_POPTR_    Q S V S S S S L D V G V V P D G S G S T L T D I S N P Y C S R S V C N G M E S A N Q T V Q L S A V D R E A R V L R Y R E
 
AT5G24930.1     K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D T N E S N D V V G H G G I F S G F G L V P T F
pt008332_POPTR_    K R K N R K F E K T I R Y A S R K A Y A E T R P R I K G R F A K R T D T E V E V D R S S - - - - L Y G F G V V P S F
 
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