fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008703 not found in 380aa AT5G57660.1 not_not 0.434268833 III
Pt008704 not found in 362aa AT5G57660.1 not_not 0.412112259 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G24930.1     MDPTWIDSLTRSCEANSNTNHKRKRERETLKHREKKKKRFRERKMASKLCDSCKSATAAL
pt008703_POPTR_ ----------------------MGIEVESLKNLTGG------WSVAAKRCDSCKTAAAAA
pt008704_POPTR_ ----------------------MGIEVESLKNLTGG------WSVAAKRCDSCKTAAAAA
                                         * *:**:           .:*:* *****:*:** 

AT5G24930.1     YCRPDAAFLCLSCDSKVHAA---NKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCD
pt008703_POPTR_ FCRADSAFLCLNCDTKIHHSQVNSKIMSRHERVWMCEVCEQAPAAVTCKADAAALCVTCD
pt008704_POPTR_ FCRADSAFLCLNCDTKIHHSQVNSKIMSRHERVWMCEVCEQAPAAVTCKADAAALCVTCD
                :**.*:*****.**:*:* :   .*: *** ************* ***************

AT5G24930.1     RDIHSANPLARRHERVPVTPFYDSVSSDGSVK-HTAVNFLDDCYFSDIDG----NGSREE
pt008703_POPTR_ ADIHSANPLARRHERVPIEPFYNSAES--IVKTSTAFNIL-------IPGENGVSGYDQN
pt008704_POPTR_ ADIHSANPLARRHERVPIEPFYNSAES--IVKTSTAFNIL-------IPGENGVSGYDQN
                 ****************: ***:*..*   **  **.*:*       * *    .*  ::

AT5G24930.1     EEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLFSDPDPYLDLDYG
pt008703_POPTR_ DDVEGVSWLLQSNHTTHDHNS----------KLQIENPVVKTGDMF-FSEIDPFLELEYQ
pt008704_POPTR_ DDVEGVSWLLQSNHTTHDHNS----------KLQIENPVVKTGDMF-FSEIDPFLELEYQ
                :: *..**** .* .*    :          ::  :.* ::**: : **: **:*:*:* 

AT5G24930.1     N-VDPKVESLEQNSSGTDGVVPVENRTVRIPTVN-ENCFEMDFTGGSKGFTYGGGYNCIS
pt008703_POPTR_ NSIDASYEKI-HGGAGADSVVPVQTKPAPLPVINHESCFDIDFC-RSKLTSFSYSSQSLS
pt008704_POPTR_ NSIDASYEKI-HGGAGADSVVPVQTKPAPLPVINHESCFDIDFC-RSKLTSFSYSSQSLS
                * :*.. *.: :..:*:*.****:.:.. :*.:* *.**::**   **  ::. . :.:*

AT5G24930.1     HSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADP--------GTQRAVPLTSAEREAR
pt008703_POPTR_ HSVSSSSLDVGVVPDGNSMSDISYPFSRSMNTTTDPSMPLSGWTANQAATQLAGIDREAR
pt008704_POPTR_ HSVSSSSLDVGVVPDGNSI------------------MPLSGWTANQAATQLAGIDREAR
                *******::*******.*:                         ..* *. *:. :****

AT5G24930.1     VMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSG---
pt008703_POPTR_ VLRYRERRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESDMD-----NLYNSPSS
pt008704_POPTR_ VLRYRERRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESDMD-----NLYNSPSS
                *:****:******************** ************: :.. *     .::..   

AT5G24930.1     --------FGLVPTF
pt008703_POPTR_ VPFMADTQYGVVPSF
pt008704_POPTR_ VPFMADTQYGVVPSF
                        :*:**:*
BoxShade v3.31 C (beta, 970507) Output
AT5G24930.1     M D P T W I D S L T R S C E A N S N T N H K R K R E R E T L K H R E K K K K R F R E R K M A S K L C D S C K S A T A A L
pt008703_POPTR_    - - - - - - - - - - - - - - - - - - - - - - M G I E V E S L K N L T G G - - - - - - W S V A A K R C D S C K T A A A A A
pt008704_POPTR_    - - - - - - - - - - - - - - - - - - - - - - M G I E V E S L K N L T G G - - - - - - W S V A A K R C D S C K T A A A A A
 
AT5G24930.1     Y C R P D A A F L C L S C D S K V H A A - - - N K L A S R H A R V W M C E V C E Q A P A H V T C K A D A A A L C V T C D
pt008703_POPTR_    F C R A D S A F L C L N C D T K I H H S Q V N S K I M S R H E R V W M C E V C E Q A P A A V T C K A D A A A L C V T C D
pt008704_POPTR_    F C R A D S A F L C L N C D T K I H H S Q V N S K I M S R H E R V W M C E V C E Q A P A A V T C K A D A A A L C V T C D
 
AT5G24930.1     R D I H S A N P L A R R H E R V P V T P F Y D S V S S D G S V K - H T A V N F L D D C Y F S D I D G - - - - N G S R E E
pt008703_POPTR_    A D I H S A N P L A R R H E R V P I E P F Y N S A E S - - I V K T S T A F N I L - - - - - - - I P G E N G V S G Y D Q N
pt008704_POPTR_    A D I H S A N P L A R R H E R V P I E P F Y N S A E S - - I V K T S T A F N I L - - - - - - - I P G E N G V S G Y D Q N
 
AT5G24930.1     E E E E A A S W L L L P N P K T T T T A T A G I V A V T S A E E V P G D S P E M N T G Q Q Y L F S D P D P Y L D L D Y G
pt008703_POPTR_    D D V E G V S W L L Q S N H T T H D H N S - - - - - - - - - - K L Q I E N P V V K T G D M F - F S E I D P F L E L E Y Q
pt008704_POPTR_    D D V E G V S W L L Q S N H T T H D H N S - - - - - - - - - - K L Q I E N P V V K T G D M F - F S E I D P F L E L E Y Q
 
AT5G24930.1     N - V D P K V E S L E Q N S S G T D G V V P V E N R T V R I P T V N - E N C F E M D F T G G S K G F T Y G G G Y N C I S
pt008703_POPTR_    N S I D A S Y E K I - H G G A G A D S V V P V Q T K P A P L P V I N H E S C F D I D F C - R S K L T S F S Y S S Q S L S
pt008704_POPTR_    N S I D A S Y E K I - H G G A G A D S V V P V Q T K P A P L P V I N H E S C F D I D F C - R S K L T S F S Y S S Q S L S
 
AT5G24930.1     H S V S S S S M E V G V V P D G G S V A D V S Y P Y G G P A T S G A D P - - - - - - - - G T Q R A V P L T S A E R E A R
pt008703_POPTR_    H S V S S S S L D V G V V P D G N S M S D I S Y P F S R S M N T T T D P S M P L S G W T A N Q A A T Q L A G I D R E A R
pt008704_POPTR_    H S V S S S S L D V G V V P D G N S I - - - - - - - - - - - - - - - - - - M P L S G W T A N Q A A T Q L A G I D R E A R
 
AT5G24930.1     V M R Y R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D T N E S N D V V G H G G I F S G - - -
pt008703_POPTR_    V L R Y R E R R K N R K F E K T I R Y A S R K A Y A E T R P R I K G R F A K R T E M E S D M D - - - - - N L Y N S P S S
pt008704_POPTR_    V L R Y R E R R K N R K F E K T I R Y A S R K A Y A E T R P R I K G R F A K R T E M E S D M D - - - - - N L Y N S P S S
 
AT5G24930.1     - - - - - - - - F G L V P T F
pt008703_POPTR_    V P F M A D T Q Y G V V P S F
pt008704_POPTR_    V P F M A D T Q Y G V V P S F
 
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