fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G24930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009045 not found in 309aa AT5G24930.1 not_1st 0.460856720 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G24930.1     MDPTWIDSLTRSCEANSNTNHKRKRERETLKHREKKKKRFRERKMASKLCDSCKSATAAL
gm009045_Glyma0 --------------------------------------------MASKLCDSCKSATATL
                                                            **************:*

AT5G24930.1     YCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDI
gm009045_Glyma0 YCRPDAAFLCGACDSKVHAANKLASRHPRVALCEVCEQAPAHVTCKADAAALCLACDRDI
                ********** :***************.** :*********************::*****

AT5G24930.1     HSANPLARRHERVPVTPFYDSVSSDGSVKHTA-VNFLDDC-YFSDIDGNGSREEEEEEAA
gm009045_Glyma0 HSANPLASRHERIPVSPFFESVH---SVKASSPINFLDDHRFFSDADADVS--TEEAEAA
                ******* ****:**:**::**    *** :: :*****  :*** *.: *   ** ***

AT5G24930.1     SWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLFS--DPDPYLDLDYGNVDP
gm009045_Glyma0 SW-LLPNPKT----------------------DLNS-SQYLFSETEPVPYIDLDYAAVDP
                ** *******                      ::*: .*****  :* **:****. ***

AT5G24930.1     KVESLEQNSSGT-DGVVPVENRTVRIPTVNENCFEMDFTGGSKGFTYGGGYNC------I
gm009045_Glyma0 KA---EQKSSATADGVVPVQSN-----------FE--------PFAYGYKYNTTLSQSQM
                *.   **:**.* ******:..           **         *:**  **       :

AT5G24930.1     SHSVSSSSMEVGVVPDGGSVADV---SYPYGGPATSGADPGTQRAVPLTSAEREARVMRY
gm009045_Glyma0 SQSVSSSSMEVGVVPDGNTMSETSNCSYSKVPPVT------VTVTAQFSAADREARVLRY
                *:***************.::::.   **.   *.*      .  :. :::*:*****:**

AT5G24930.1     REKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGFGLVPTF
gm009045_Glyma0 REKRKNRKFEKTIRYASRKAYAEARPRIKGRFAKRTDPDP----------LAGYGVVPSC
                *********************** *************.:           ::*:*:**:
BoxShade v3.31 C (beta, 970507) Output
AT5G24930.1     M D P T W I D S L T R S C E A N S N T N H K R K R E R E T L K H R E K K K K R F R E R K M A S K L C D S C K S A T A A L
gm009045_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S K L C D S C K S A T A T L
 
AT5G24930.1     Y C R P D A A F L C L S C D S K V H A A N K L A S R H A R V W M C E V C E Q A P A H V T C K A D A A A L C V T C D R D I
gm009045_Glyma0    Y C R P D A A F L C G A C D S K V H A A N K L A S R H P R V A L C E V C E Q A P A H V T C K A D A A A L C L A C D R D I
 
AT5G24930.1     H S A N P L A R R H E R V P V T P F Y D S V S S D G S V K H T A - V N F L D D C - Y F S D I D G N G S R E E E E E E A A
gm009045_Glyma0    H S A N P L A S R H E R I P V S P F F E S V H - - - S V K A S S P I N F L D D H R F F S D A D A D V S - - T E E A E A A
 
AT5G24930.1     S W L L L P N P K T T T T A T A G I V A V T S A E E V P G D S P E M N T G Q Q Y L F S - - D P D P Y L D L D Y G N V D P
gm009045_Glyma0    S W - L L P N P K T - - - - - - - - - - - - - - - - - - - - - - D L N S - S Q Y L F S E T E P V P Y I D L D Y A A V D P
 
AT5G24930.1     K V E S L E Q N S S G T - D G V V P V E N R T V R I P T V N E N C F E M D F T G G S K G F T Y G G G Y N C - - - - - - I
gm009045_Glyma0    K A - - - E Q K S S A T A D G V V P V Q S N - - - - - - - - - - - F E - - - - - - - - P F A Y G Y K Y N T T L S Q S Q M
 
AT5G24930.1     S H S V S S S S M E V G V V P D G G S V A D V - - - S Y P Y G G P A T S G A D P G T Q R A V P L T S A E R E A R V M R Y
gm009045_Glyma0    S Q S V S S S S M E V G V V P D G N T M S E T S N C S Y S K V P P V T - - - - - - V T V T A Q F S A A D R E A R V L R Y
 
AT5G24930.1     R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D T N E S N D V V G H G G I F S G F G L V P T F
gm009045_Glyma0    R E K R K N R K F E K T I R Y A S R K A Y A E A R P R I K G R F A K R T D P D P - - - - - - - - - - L A G Y G V V P S C
 
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