fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25160.1 HEEQQKLDLSLKL at 227/235 in AT5G25160.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009089 QEEMKHLDLSLKL in 274/281 AT5G25160.1 1st_1st 0.321041214 Ib
Pt030824 QDDLQKLDLSLKL in 279/286 AT5G25160.1 1st_1st 0.329718004 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G25160.1     MD-----ASIVSSSTAF------PYQ-------------DSLNQSIEDEERDVHN-----
pt030824_POPTR_ MEPPARSEACLSETSSIISVSNAPLSLKPSVIMKSQKEVKQLEEDQEEEEEERHQQGVDT
gm009089_Glyma0 METLSH-EPLLYDNSA----GETPPS--PSTPLQNSREKKQLSVKEEEEEEKEAK--ADT
                *:      . : ..::       * .             ..*. . *:**..  :     

AT5G25160.1     -------------------SSHELNLIDCID-DTTSIVNESTTS--TEQKLFSCNYCQRT
pt030824_POPTR_ NYGLVLDLSLSSKDSKQDSSKPQLNLIDSFDMDPSRKSLDTPQGNETEPRVFSCNYCQRK
gm009089_Glyma0 ----LLDLNAPGGDSAIGCS-PVLNLITCLDTDLSSTTSENQHG--SEPRVFSCNYCQRK
                                   *   **** .:* * :    :.  .  :* ::********.

AT5G25160.1     FYSSQALGGHQNAHKRERTLAKRGQR------MAASASAFGHP----------YG-FSPL
pt030824_POPTR_ FYSSQALGGHQNAHKRERTLSKRGQR------ISAASFALLQP---NYSHQNGYTSMASL
gm009089_Glyma0 FYSSQALGGHQNAHKRERSIAKRGHQRSGSRLMASATTALGIPFLHNHLHHH-YATMASL
                ******************:::***::      ::::: *:  *          *  ::.*

AT5G25160.1     PFHGQYNNHRSLGIQAHSISHKL-------SSYNGFGGHYGQINWSRLPFDQQPAIGKFP
pt030824_POPTR_ PLHG--SFNRSLGIQVHSMIHKP-------FSTSSSSSIYGQNGWSRKPIDQQPAIGRL-
gm009089_Glyma0 PLHGASSNNKPLGIQAHSIIHKPSSSNYSHFSFNGFGTTFGHRGWSRPLIDQQPGIGKL-
                *:**  . ::.****.**: **         * .. .  :*: .***  :****.**:: 

AT5G25160.1     SMDNFHHHHHQMMMMAPSV--NSRSNNIDSPS--NTGRVLEGSPTLEQWHG---DKGLLL
pt030824_POPTR_ ASDKFQ--------MATSIKGSSSSNGVARFE--STRKF--SPVSTEGIGGFWWDGGVNH
gm009089_Glyma0 TMESFH---------------KTSRGNVGKFDVVKTTRL--NSATNEEISGYMVS-GISL
                : :.*:               .:  ..:   .  .* :.  .. : *   *   . *:  

AT5G25160.1     STSHHEEQQKLDLSLKL
pt030824_POPTR_ LKTKQDDLQKLDLSLKL
gm009089_Glyma0 LKTNQEEMKHLDLSLKL
                 .::::: ::*******
BoxShade v3.31 C (beta, 970507) Output
AT5G25160.1     M D - - - - - A S I V S S S T A F - - - - - - P Y Q - - - - - - - - - - - - - D S L N Q S I E D E E R D V H N - - - - -
pt030824_POPTR_    M E P P A R S E A C L S E T S S I I S V S N A P L S L K P S V I M K S Q K E V K Q L E E D Q E E E E E E R H Q Q G V D T
gm009089_Glyma0    M E T L S H - E P L L Y D N S A - - - - G E T P P S - - P S T P L Q N S R E K K Q L S V K E E E E E E K E A K - - A D T
 
AT5G25160.1     - - - - - - - - - - - - - - - - - - - S S H E L N L I D C I D - D T T S I V N E S T T S - - T E Q K L F S C N Y C Q R T
pt030824_POPTR_    N Y G L V L D L S L S S K D S K Q D S S K P Q L N L I D S F D M D P S R K S L D T P Q G N E T E P R V F S C N Y C Q R K
gm009089_Glyma0    - - - - L L D L N A P G G D S A I G C S - P V L N L I T C L D T D L S S T T S E N Q H G - - S E P R V F S C N Y C Q R K
 
AT5G25160.1     F Y S S Q A L G G H Q N A H K R E R T L A K R G Q R - - - - - - M A A S A S A F G H P - - - - - - - - - - Y G - F S P L
pt030824_POPTR_    F Y S S Q A L G G H Q N A H K R E R T L S K R G Q R - - - - - - I S A A S F A L L Q P - - - N Y S H Q N G Y T S M A S L
gm009089_Glyma0    F Y S S Q A L G G H Q N A H K R E R S I A K R G H Q R S G S R L M A S A T T A L G I P F L H N H L H H H - Y A T M A S L
 
AT5G25160.1     P F H G Q Y N N H R S L G I Q A H S I S H K L - - - - - - - S S Y N G F G G H Y G Q I N W S R L P F D Q Q P A I G K F P
pt030824_POPTR_    P L H G - - S F N R S L G I Q V H S M I H K P - - - - - - - F S T S S S S S I Y G Q N G W S R K P I D Q Q P A I G R L -
gm009089_Glyma0    P L H G A S S N N K P L G I Q A H S I I H K P S S S N Y S H F S F N G F G T T F G H R G W S R P L I D Q Q P G I G K L -
 
AT5G25160.1     S M D N F H H H H H Q M M M M A P S V - - N S R S N N I D S P S - - N T G R V L E G S P T L E Q W H G - - - D K G L L L
pt030824_POPTR_    A S D K F Q - - - - - - - - M A T S I K G S S S S N G V A R F E - - S T R K F - - S P V S T E G I G G F W W D G G V N H
gm009089_Glyma0    T M E S F H - - - - - - - - - - - - - - - K T S R G N V G K F D V V K T T R L - - N S A T N E E I S G Y M V S - G I S L
 
AT5G25160.1     S T S H H E E Q Q K L D L S L K L
pt030824_POPTR_    L K T K Q D D L Q K L D L S L K L
gm009089_Glyma0    L K T N Q E E M K H L D L S L K L
 
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