fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25160.1 HEEQQKLDLSLKL at 227/235 in AT5G25160.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030824 QDDLQKLDLSLKL in 279/286 AT5G25160.1 1st_1st 0.329718004 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25160.1     MD------------ASIVSSSTAFPYQ-------------DSLNQSIEDEERDVH-----
pt030824_POPTR_ MEPPARSEACLSETSSIISVSNA-PLSLKPSVIMKSQKEVKQLEEDQEEEEEERHQQGVD
                *:            :**:* *.* * .             ..*::. *:**.: *     

AT5G25160.1     -------------------NSSHELNLIDCID---DTTSIVNESTTSTEQKLFSCNYCQR
pt030824_POPTR_ TNYGLVLDLSLSSKDSKQDSSKPQLNLIDSFDMDPSRKSLDTPQGNETEPRVFSCNYCQR
                                   .*. :*****.:*   . .*: . . ..** ::********

AT5G25160.1     TFYSSQALGGHQNAHKRERTLAKRGQRMAASASA-----FGHPYGFS---PLPFHGQYNN
pt030824_POPTR_ KFYSSQALGGHQNAHKRERTLSKRGQRISAASFALLQPNYSHQNGYTSMASLPLHGSFN-
                .********************:*****::*:: *     :.*  *::   .**:**.:* 

AT5G25160.1     HRSLGIQAHSISHKLSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHHQMMMM
pt030824_POPTR_ -RSLGIQVHSMIHKPFSTSSSSSIYGQNGWSRKPIDQQPAIGRLAS-DKFQ--------M
                 ******.**: **  * .. .. *** .*** *:*******::.* *:*:        *

AT5G25160.1     APSV--NSRSNNIDSPSNTGRVLEGSPTLEQWHG----DKGLLLSTSHHEEQQKLDLSLK
pt030824_POPTR_ ATSIKGSSSSNGVARFESTRKF---SPVSTEGIGGFWWDGGVNHLKTKQDDLQKLDLSLK
                *.*:  .* **.:   ..* :.   **.  :  *    * *:   .::::: ********

AT5G25160.1     L
pt030824_POPTR_ L
                *
BoxShade v3.31 C (beta, 970507) Output
AT5G25160.1     M D - - - - - - - - - - - - A S I V S S S T A F P Y Q - - - - - - - - - - - - - D S L N Q S I E D E E R D V H - - - - -
pt030824_POPTR_    M E P P A R S E A C L S E T S S I I S V S N A - P L S L K P S V I M K S Q K E V K Q L E E D Q E E E E E E R H Q Q G V D
 
AT5G25160.1     - - - - - - - - - - - - - - - - - - - N S S H E L N L I D C I D - - - D T T S I V N E S T T S T E Q K L F S C N Y C Q R
pt030824_POPTR_    T N Y G L V L D L S L S S K D S K Q D S S K P Q L N L I D S F D M D P S R K S L D T P Q G N E T E P R V F S C N Y C Q R
 
AT5G25160.1     T F Y S S Q A L G G H Q N A H K R E R T L A K R G Q R M A A S A S A - - - - - F G H P Y G F S - - - P L P F H G Q Y N N
pt030824_POPTR_    K F Y S S Q A L G G H Q N A H K R E R T L S K R G Q R I S A A S F A L L Q P N Y S H Q N G Y T S M A S L P L H G S F N -
 
AT5G25160.1     H R S L G I Q A H S I S H K L S S Y N G F G G H Y G Q I N W S R L P F D Q Q P A I G K F P S M D N F H H H H H Q M M M M
pt030824_POPTR_    - R S L G I Q V H S M I H K P F S T S S S S S I Y G Q N G W S R K P I D Q Q P A I G R L A S - D K F Q - - - - - - - - M
 
AT5G25160.1     A P S V - - N S R S N N I D S P S N T G R V L E G S P T L E Q W H G - - - - D K G L L L S T S H H E E Q Q K L D L S L K
pt030824_POPTR_    A T S I K G S S S S N G V A R F E S T R K F - - - S P V S T E G I G G F W W D G G V N H L K T K Q D D L Q K L D L S L K
 
AT5G25160.1     L
pt030824_POPTR_    L
 
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