Input
| Putative repression domain
|
|
AT5G25160.1 |
HEEQQKLDLSLKL at 227/235 in AT5G25160.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt030824 |
QDDLQKLDLSLKL in 279/286 |
AT5G25160.1 |
1st_1st |
0.329718004 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G25160.1 MD------------ASIVSSSTAFPYQ-------------DSLNQSIEDEERDVH-----
pt030824_POPTR_ MEPPARSEACLSETSSIISVSNA-PLSLKPSVIMKSQKEVKQLEEDQEEEEEERHQQGVD
*: :**:* *.* * . ..*::. *:**.: *
AT5G25160.1 -------------------NSSHELNLIDCID---DTTSIVNESTTSTEQKLFSCNYCQR
pt030824_POPTR_ TNYGLVLDLSLSSKDSKQDSSKPQLNLIDSFDMDPSRKSLDTPQGNETEPRVFSCNYCQR
.*. :*****.:* . .*: . . ..** ::********
AT5G25160.1 TFYSSQALGGHQNAHKRERTLAKRGQRMAASASA-----FGHPYGFS---PLPFHGQYNN
pt030824_POPTR_ KFYSSQALGGHQNAHKRERTLSKRGQRISAASFALLQPNYSHQNGYTSMASLPLHGSFN-
.********************:*****::*:: * :.* *:: .**:**.:*
AT5G25160.1 HRSLGIQAHSISHKLSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHHQMMMM
pt030824_POPTR_ -RSLGIQVHSMIHKPFSTSSSSSIYGQNGWSRKPIDQQPAIGRLAS-DKFQ--------M
******.**: ** * .. .. *** .*** *:*******::.* *:*: *
AT5G25160.1 APSV--NSRSNNIDSPSNTGRVLEGSPTLEQWHG----DKGLLLSTSHHEEQQKLDLSLK
pt030824_POPTR_ ATSIKGSSSSNGVARFESTRKF---SPVSTEGIGGFWWDGGVNHLKTKQDDLQKLDLSLK
*.*: .* **.: ..* :. **. : * * *: .::::: ********
AT5G25160.1 L
pt030824_POPTR_ L
*
BoxShade v3.31 C (beta, 970507) Output
AT5G25160.1 |
M |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
S |
I |
V |
S |
S |
S |
T |
A |
F |
P |
Y |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
S |
L |
N |
Q |
S |
I |
E |
D |
E |
E |
R |
D |
V |
H |
- |
- |
- |
- |
- |
pt030824_POPTR_ |
M |
E |
P |
P |
A |
R |
S |
E |
A |
C |
L |
S |
E |
T |
S |
S |
I |
I |
S |
V |
S |
N |
A |
- |
P |
L |
S |
L |
K |
P |
S |
V |
I |
M |
K |
S |
Q |
K |
E |
V |
K |
Q |
L |
E |
E |
D |
Q |
E |
E |
E |
E |
E |
E |
R |
H |
Q |
Q |
G |
V |
D |
|
AT5G25160.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
S |
S |
H |
E |
L |
N |
L |
I |
D |
C |
I |
D |
- |
- |
- |
D |
T |
T |
S |
I |
V |
N |
E |
S |
T |
T |
S |
T |
E |
Q |
K |
L |
F |
S |
C |
N |
Y |
C |
Q |
R |
pt030824_POPTR_ |
T |
N |
Y |
G |
L |
V |
L |
D |
L |
S |
L |
S |
S |
K |
D |
S |
K |
Q |
D |
S |
S |
K |
P |
Q |
L |
N |
L |
I |
D |
S |
F |
D |
M |
D |
P |
S |
R |
K |
S |
L |
D |
T |
P |
Q |
G |
N |
E |
T |
E |
P |
R |
V |
F |
S |
C |
N |
Y |
C |
Q |
R |
|
AT5G25160.1 |
T |
F |
Y |
S |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
R |
T |
L |
A |
K |
R |
G |
Q |
R |
M |
A |
A |
S |
A |
S |
A |
- |
- |
- |
- |
- |
F |
G |
H |
P |
Y |
G |
F |
S |
- |
- |
- |
P |
L |
P |
F |
H |
G |
Q |
Y |
N |
N |
pt030824_POPTR_ |
K |
F |
Y |
S |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
R |
T |
L |
S |
K |
R |
G |
Q |
R |
I |
S |
A |
A |
S |
F |
A |
L |
L |
Q |
P |
N |
Y |
S |
H |
Q |
N |
G |
Y |
T |
S |
M |
A |
S |
L |
P |
L |
H |
G |
S |
F |
N |
- |
|
AT5G25160.1 |
H |
R |
S |
L |
G |
I |
Q |
A |
H |
S |
I |
S |
H |
K |
L |
S |
S |
Y |
N |
G |
F |
G |
G |
H |
Y |
G |
Q |
I |
N |
W |
S |
R |
L |
P |
F |
D |
Q |
Q |
P |
A |
I |
G |
K |
F |
P |
S |
M |
D |
N |
F |
H |
H |
H |
H |
H |
Q |
M |
M |
M |
M |
pt030824_POPTR_ |
- |
R |
S |
L |
G |
I |
Q |
V |
H |
S |
M |
I |
H |
K |
P |
F |
S |
T |
S |
S |
S |
S |
S |
I |
Y |
G |
Q |
N |
G |
W |
S |
R |
K |
P |
I |
D |
Q |
Q |
P |
A |
I |
G |
R |
L |
A |
S |
- |
D |
K |
F |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
M |
|
AT5G25160.1 |
A |
P |
S |
V |
- |
- |
N |
S |
R |
S |
N |
N |
I |
D |
S |
P |
S |
N |
T |
G |
R |
V |
L |
E |
G |
S |
P |
T |
L |
E |
Q |
W |
H |
G |
- |
- |
- |
- |
D |
K |
G |
L |
L |
L |
S |
T |
S |
H |
H |
E |
E |
Q |
Q |
K |
L |
D |
L |
S |
L |
K |
pt030824_POPTR_ |
A |
T |
S |
I |
K |
G |
S |
S |
S |
S |
N |
G |
V |
A |
R |
F |
E |
S |
T |
R |
K |
F |
- |
- |
- |
S |
P |
V |
S |
T |
E |
G |
I |
G |
G |
F |
W |
W |
D |
G |
G |
V |
N |
H |
L |
K |
T |
K |
Q |
D |
D |
L |
Q |
K |
L |
D |
L |
S |
L |
K |
|
AT5G25160.1 |
L |
pt030824_POPTR_ |
L |
|
|