fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25160.1 HEEQQKLDLSLKL at 227/235 in AT5G25160.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009089 QEEMKHLDLSLKL in 274/281 AT5G25160.1 1st_1st 0.321041214 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25160.1     ------------MDASIVSSSTAFPYQDSLNQ---SIEDEERDVHNSSHE----------
gm009089_Glyma0 METLSHEPLLYDNSAGETPPSPSTPLQNSREKKQLSVKEEEEEEKEAKADTLLDLNAPGG
                             .*. ...*.: * *:* ::   *:::**.: :::. :          

AT5G25160.1     ---------LNLIDCID-DTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKR
gm009089_Glyma0 DSAIGCSPVLNLITCLDTDLSSTTSENQHGSEPRVFSCNYCQRKFYSSQALGGHQNAHKR
                         **** *:* * :* ..*.  .:* ::********.****************

AT5G25160.1     ERTLAKRGQR------MAASASAFGHPY----------GFSPLPFHGQYNNHRSLGIQAH
gm009089_Glyma0 ERSIAKRGHQRSGSRLMASATTALGIPFLHNHLHHHYATMASLPLHGASSNNKPLGIQAH
                **::****::      **::::*:* *:           ::.**:**  .*::.******

AT5G25160.1     SISHKLS-------SYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAP
gm009089_Glyma0 SIIHKPSSSNYSHFSFNGFGTTFGHRGWSRPLIDQQPGIGKL-TMESFHK----------
                ** ** *       *:****  :*: .***  :****.***: :*:.**:          

AT5G25160.1     SVNSRSN--NIDSPSNTGRVLEGSPTLEQWHGD--KGLLLSTSHHEEQQKLDLSLKL
gm009089_Glyma0 --TSRGNVGKFDVVKTT-RL--NSATNEEISGYMVSGISLLKTNQEEMKHLDLSLKL
                  .**.*  ::*  ..* *:  .*.* *:  *   .*: * .:::** ::*******
BoxShade v3.31 C (beta, 970507) Output
AT5G25160.1     - - - - - - - - - - - - M D A S I V S S S T A F P Y Q D S L N Q - - - S I E D E E R D V H N S S H E - - - - - - - - - -
gm009089_Glyma0    M E T L S H E P L L Y D N S A G E T P P S P S T P L Q N S R E K K Q L S V K E E E E E E K E A K A D T L L D L N A P G G
 
AT5G25160.1     - - - - - - - - - L N L I D C I D - D T T S I V N E S T T S T E Q K L F S C N Y C Q R T F Y S S Q A L G G H Q N A H K R
gm009089_Glyma0    D S A I G C S P V L N L I T C L D T D L S S T T S E N Q H G S E P R V F S C N Y C Q R K F Y S S Q A L G G H Q N A H K R
 
AT5G25160.1     E R T L A K R G Q R - - - - - - M A A S A S A F G H P Y - - - - - - - - - - G F S P L P F H G Q Y N N H R S L G I Q A H
gm009089_Glyma0    E R S I A K R G H Q R S G S R L M A S A T T A L G I P F L H N H L H H H Y A T M A S L P L H G A S S N N K P L G I Q A H
 
AT5G25160.1     S I S H K L S - - - - - - - S Y N G F G G H Y G Q I N W S R L P F D Q Q P A I G K F P S M D N F H H H H H Q M M M M A P
gm009089_Glyma0    S I I H K P S S S N Y S H F S F N G F G T T F G H R G W S R P L I D Q Q P G I G K L - T M E S F H K - - - - - - - - - -
 
AT5G25160.1     S V N S R S N - - N I D S P S N T G R V L E G S P T L E Q W H G D - - K G L L L S T S H H E E Q Q K L D L S L K L
gm009089_Glyma0    - - T S R G N V G K F D V V K T T - R L - - N S A T N E E I S G Y M V S G I S L L K T N Q E E M K H L D L S L K L
 
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