fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp007272 not found in 240aa AT5G25190.1 1st_1st 0.381118881 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25190.1     MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
pp007272_Pp1s79 MGRP-QRYRGVRQRHWGSWVSEIRHPLLKTRVWLGTFETAEDAAHAYDEAARLMCGARAR
                *.** **:***********************:************:***********.***

AT5G25190.1     TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTAR-SQSADSDGV
pp007272_Pp1s79 TNFPYDPNAPKGLNSQMLSATLSAKLQRWYVQSQQ---RGGAQGKTKDARMTQSLTCLCL
                *****:***    .*::*****:***:: *: * *   :  :* :*: ** :**  .  :

AT5G25190.1     TANESHLNRGVTETTEIKWEDGNANMQQNFRP-------------------LEEDHI-EQ
pp007272_Pp1s79 DAEQSNL--GIWQKKTGKQAEANWVRKVQFRDNASLHADSPQPENSSGSSMSEEDKFAAE
                 *::*:*  *: :..  *  :.*   : :**                     ***::  :

AT5G25190.1     MIEELL--------HYGSIEL----CSVLPTQTL--------------------------
pp007272_Pp1s79 MIEELLGHSPGQFSDFGSPALSDSSCSSSPCSGITAASKKERLLICWRGMAHTKDDWSPR
                ******        .:**  *    **  * . :                          

AT5G25190.1     ------
pp007272_Pp1s79 SILHPP
BoxShade v3.31 C (beta, 970507) Output
AT5G25190.1     M A R P Q Q R F R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P R A R
pp007272_Pp1s79    M G R P - Q R Y R G V R Q R H W G S W V S E I R H P L L K T R V W L G T F E T A E D A A H A Y D E A A R L M C G A R A R
 
AT5G25190.1     T N F P Y N P N A I P T S S S K L L S A T L T A K L H K C Y M A S L Q M T K Q T Q T Q T Q T Q T A R - S Q S A D S D G V
pp007272_Pp1s79    T N F P Y D P N A P K G L N S Q M L S A T L S A K L Q R W Y V Q S Q Q - - - R G G A Q G K T K D A R M T Q S L T C L C L
 
AT5G25190.1     T A N E S H L N R G V T E T T E I K W E D G N A N M Q Q N F R P - - - - - - - - - - - - - - - - - - - L E E D H I - E Q
pp007272_Pp1s79    D A E Q S N L - - G I W Q K K T G K Q A E A N W V R K V Q F R D N A S L H A D S P Q P E N S S G S S M S E E D K F A A E
 
AT5G25190.1     M I E E L L - - - - - - - - H Y G S I E L - - - - C S V L P T Q T L - - - - - - - - - - - - - - - - - - - - - - - - - -
pp007272_Pp1s79    M I E E L L G H S P G Q F S D F G S P A L S D S S C S S S P C S G I T A A S K K E R L L I C W R G M A H T K D D W S P R
 
AT5G25190.1     - - - - - -
pp007272_Pp1s79    S I L H P P
 
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