fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005170 not found in 195aa AT5G25190.1 not_1st 0.590909090 II
Pt032961 not found in 181aa AT5G25190.1 not_1st 0.580419580 II
Pt011805 not found in 180aa AT5G25190.1 not_1st 0.573426573 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G25190.1     MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
pt011805_POPTR_ MTRPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
pt005170_POPTR_ MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
pt032961_POPTR_ MTRPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKSR
                *:*****:*************************************************::*

AT5G25190.1     TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQT---QTQTQTQTARS-QSAD-
pt011805_POPTR_ TNFPHNPNEPQSSSSKLLSATLAAKLHKCHMTSLQATKKN----VTKQSHDAQC-TSFGT
pt005170_POPTR_ TNFPYNPNASQSASSKLLSATLTAKLHRCYMASLQVTKKTSLHEQKQQQQKAPT-SLANT
pt032961_POPTR_ TNFPYNPNEPQSSSSKLLSATLAAKLHKCHMASLQATKKN----VTKQSYEAQCKKTFDT
                ****:***   ::*********:****:*:*:*** **:.       *   *      . 

AT5G25190.1     -SDGVTANESHLNRGVTETTEIKWEDGNANM------------QQNFRPLEEDHIEQMIE
pt011805_POPTR_ -SHGIAGKTVE--------NGSKWQEG--NWVGGGSQAGNDDHQEHFKSLEDHHIEQMIE
pt005170_POPTR_ PTNGIVIKSEELDALLPEKSPLQVQEAEANWVYKKVQVDN-NNQQFIKPLEDHHIEQMIE
pt032961_POPTR_ -SHGIAGETVE--------TGSKWQEG--NWAGEDSQVGNGDHQQHFKSLEAHHIEQMIE
                 :.*:. :  .        .  : ::.  *             *: ::.** .*******

AT5G25190.1     ELLHYGSIELCSVLPTQTL
pt011805_POPTR_ ELLDRGSMEFCYVDST---
pt005170_POPTR_ ELLDYGSIEFFSGVTTQ--
pt032961_POPTR_ ELLDCGSMEFCSAGST---
                ***. **:*:    .*
BoxShade v3.31 C (beta, 970507) Output
AT5G25190.1     M A R P Q Q R F R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P R A R
pt011805_POPTR_    M T R P Q Q R Y R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P K A R
pt005170_POPTR_    M A R P Q Q R Y R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P R A R
pt032961_POPTR_    M T R P Q Q R Y R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P K S R
 
AT5G25190.1     T N F P Y N P N A I P T S S S K L L S A T L T A K L H K C Y M A S L Q M T K Q T - - - Q T Q T Q T Q T A R S - Q S A D -
pt011805_POPTR_    T N F P H N P N E P Q S S S S K L L S A T L A A K L H K C H M T S L Q A T K K N - - - - V T K Q S H D A Q C - T S F G T
pt005170_POPTR_    T N F P Y N P N A S Q S A S S K L L S A T L T A K L H R C Y M A S L Q V T K K T S L H E Q K Q Q Q Q K A P T - S L A N T
pt032961_POPTR_    T N F P Y N P N E P Q S S S S K L L S A T L A A K L H K C H M A S L Q A T K K N - - - - V T K Q S Y E A Q C K K T F D T
 
AT5G25190.1     - S D G V T A N E S H L N R G V T E T T E I K W E D G N A N M - - - - - - - - - - - - Q Q N F R P L E E D H I E Q M I E
pt011805_POPTR_    - S H G I A G K T V E - - - - - - - - N G S K W Q E G - - N W V G G G S Q A G N D D H Q E H F K S L E D H H I E Q M I E
pt005170_POPTR_    P T N G I V I K S E E L D A L L P E K S P L Q V Q E A E A N W V Y K K V Q V D N - N N Q Q F I K P L E D H H I E Q M I E
pt032961_POPTR_    - S H G I A G E T V E - - - - - - - - T G S K W Q E G - - N W A G E D S Q V G N G D H Q Q H F K S L E A H H I E Q M I E
 
AT5G25190.1     E L L H Y G S I E L C S V L P T Q T L
pt011805_POPTR_    E L L D R G S M E F C Y V D S T - - -
pt005170_POPTR_    E L L D Y G S I E F F S G V T T Q - -
pt032961_POPTR_    E L L D C G S M E F C S A G S T - - -
 
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