fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008425 not found in 194aa AT5G25190.1 1st_1st 0.597902097 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25190.1     MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
pt008425_POPTR_ MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
                *******:****************************************************

AT5G25190.1     TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSAD-----
pt008425_POPTR_ TNFPYNPNASQSASSKLLSATLTAKLHRCYMASLQVTKQTSLQEQKQQQQKAPTSLVKTP
                *********  ::**************:*******:****. * *.*  :. .:.     

AT5G25190.1     SDGVTANESHLNRGVTETTEIKWEDGNANM----------QQNFRPLEEDHIEQMIEELL
pt008425_POPTR_ TNSIVIKSEELDALQPEKSPLQVQEAEANWVYKKVQVDNNQQFIKPLEDHHIEQMIEELL
                ::.:. :...*:   .*.: :: ::.:**           ** ::***:.**********

AT5G25190.1     HYGSIELCSVLPTQTL
pt008425_POPTR_ DYGSIELCSGVATQ--
                .******** :.**
BoxShade v3.31 C (beta, 970507) Output
AT5G25190.1     M A R P Q Q R F R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P R A R
pt008425_POPTR_    M A R P Q Q R Y R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P R A R
 
AT5G25190.1     T N F P Y N P N A I P T S S S K L L S A T L T A K L H K C Y M A S L Q M T K Q T Q T Q T Q T Q T A R S Q S A D - - - - -
pt008425_POPTR_    T N F P Y N P N A S Q S A S S K L L S A T L T A K L H R C Y M A S L Q V T K Q T S L Q E Q K Q Q Q Q K A P T S L V K T P
 
AT5G25190.1     S D G V T A N E S H L N R G V T E T T E I K W E D G N A N M - - - - - - - - - - Q Q N F R P L E E D H I E Q M I E E L L
pt008425_POPTR_    T N S I V I K S E E L D A L Q P E K S P L Q V Q E A E A N W V Y K K V Q V D N N Q Q F I K P L E D H H I E Q M I E E L L
 
AT5G25190.1     H Y G S I E L C S V L P T Q T L
pt008425_POPTR_    D Y G S I E L C S G V A T Q - -
 
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