fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os010288 not found in 172aa AT5G25190.1 1st_1st 0.437062937 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25190.1     MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Os010288_Os02t0 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCGPRAR
                *******:********************************************:*******

AT5G25190.1     TNFPY----NPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQ----
Os010288_Os02t0 TNFPLADATAAAAAAAASSSFLSAALVAKLHRFNLASVQATQRQREAAATAAAASSASAT
                ****      . * .::**.:***:*.****:  :**:* *:: :  : * :* *.    

AT5G25190.1     --------SADSDGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEEL
Os010288_Os02t0 TPPLGNAAAADDDART----------TTTYGAEWSG---------RFLEEQHVEQMIDEL
                        :**.*. *          * *   :*..         * ***:*:****:**

AT5G25190.1     LHYG-SIELCSVLPTQTL
Os010288_Os02t0 LDSNFSMEICY-------
                *. . *:*:*
BoxShade v3.31 C (beta, 970507) Output
AT5G25190.1     M A R P Q Q R F R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P R A R
Os010288_Os02t0    M A R P Q Q R Y R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R I M C G P R A R
 
AT5G25190.1     T N F P Y - - - - N P N A I P T S S S K L L S A T L T A K L H K C Y M A S L Q M T K Q T Q T Q T Q T Q T A R S Q - - - -
Os010288_Os02t0    T N F P L A D A T A A A A A A A A S S S F L S A A L V A K L H R F N L A S V Q A T Q R Q R E A A A T A A A A S S A S A T
 
AT5G25190.1     - - - - - - - - S A D S D G V T A N E S H L N R G V T E T T E I K W E D G N A N M Q Q N F R P L E E D H I E Q M I E E L
Os010288_Os02t0    T P P L G N A A A A D D D A R T - - - - - - - - - - T T T Y G A E W S G - - - - - - - - - R F L E E Q H V E Q M I D E L
 
AT5G25190.1     L H Y G - S I E L C S V L P T Q T L
Os010288_Os02t0    L D S N F S M E I C Y - - - - - - -
 
0