fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os010288 not found in 172aa AT5G25190.1 1st_1st 0.437062937 Ia
Os023854 not found in 178aa AT5G25190.1 not_1st 0.412587412 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G25190.1     MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Os010288_Os02t0 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCGPRAR
Os023854_Os06t0 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCGPRVR
                *******:********************************************:*****.*

AT5G25190.1     TNFPY----------NPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQ-TQTQTQTQTA
Os010288_Os02t0 TNFP--LADATAAA----AAAAASSSFLSAALVAKLHRFNLASVQATQR----QREAAAT
Os023854_Os06t0 TNFPHDVADEAAPPPPPHSAAAASSSFLSAALVAKLHRFNLASVQAAQRGNSNDDDSTTS
                ****              : .::**.:***:*.****:  :**:* :::    : :: ::

AT5G25190.1     RSQSADSDGVT-----ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEEL
Os010288_Os02t0 AAAASSASATTPPLGNAAAADDDARTTTTYGAEWSGRF---------LEEQHVEQMIDEL
Os023854_Os06t0 SSAAASSRAVIPSLPAAAGALGNAAAT----AEWSGGF---------LEEQYVDQMIEEL
                 : ::.: ..      *  :  :  .*     :*..           ***::::***:**

AT5G25190.1     LHYG-SIEL-CSVLPTQTL
Os010288_Os02t0 LDSNFSMEI-CY-------
Os023854_Os06t0 LDSNFSMEISC--------
                *. . *:*: *
BoxShade v3.31 C (beta, 970507) Output
AT5G25190.1     M A R P Q Q R F R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P R A R
Os010288_Os02t0    M A R P Q Q R Y R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R I M C G P R A R
Os023854_Os06t0    M A R P Q Q R Y R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R I M C G P R V R
 
AT5G25190.1     T N F P Y - - - - - - - - - - N P N A I P T S S S K L L S A T L T A K L H K C Y M A S L Q M T K Q - T Q T Q T Q T Q T A
Os010288_Os02t0    T N F P - - L A D A T A A A - - - - A A A A A S S S F L S A A L V A K L H R F N L A S V Q A T Q R - - - - Q R E A A A T
Os023854_Os06t0    T N F P H D V A D E A A P P P P P H S A A A A S S S F L S A A L V A K L H R F N L A S V Q A A Q R G N S N D D D S T T S
 
AT5G25190.1     R S Q S A D S D G V T - - - - - A N E S H L N R G V T E T T E I K W E D G N A N M Q Q N F R P L E E D H I E Q M I E E L
Os010288_Os02t0    A A A A S S A S A T T P P L G N A A A A D D D A R T T T T Y G A E W S G R F - - - - - - - - - L E E Q H V E Q M I D E L
Os023854_Os06t0    S S A A A S S R A V I P S L P A A A G A L G N A A A T - - - - A E W S G G F - - - - - - - - - L E E Q Y V D Q M I E E L
 
AT5G25190.1     L H Y G - S I E L - C S V L P T Q T L
Os010288_Os02t0    L D S N F S M E I - C Y - - - - - - -
Os023854_Os06t0    L D S N F S M E I S C - - - - - - - -
 
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