fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028146 not found in 207aa AT5G25190.1 1st_1st 0.423076923 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25190.1     -----------------------MARPQQRFRGVRQRHWGSWVS-----EIRHPL----L
Sb028146_Sorbi1 LAANLHGEVGVQQLLDHLLHVLLLQEPAAPLRARRWRRGGGGGSGRGGCSRRLPLPLRGL
                                       : .*   :*. * *: *.  *     . * **    *

AT5G25190.1     KTR----IWLGTFETAED-----------------AARAY--DEAARLMCGPR-------
Sb028146_Sorbi1 HGRQVEPVQLLDERRGEERRGGGGGGRVGGVGGEVGARAWPAHDPSRLVVGARRVLRRLE
                : *    : *   . .*:                 .***:  .:.:**: *.*       

AT5G25190.1     ------------ARTNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQT
Sb028146_Sorbi1 GAQPYPRLQERVADLGDPGAPVALPHAAVPLLRPG-----HRRRSSSTAAVPLPSRSTFP
                            *  . *  * *:* ::  ** .      *:   :*   .  .. .* .

AT5G25190.1     QTARSQSADSDGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLH
Sb028146_Sorbi1 LSVRRRSP---ALVRSGSCCARGEEEIA--------AEVQQ-------------------
                 :.* :*.   .:. . *   **  * :        *::**                   

AT5G25190.1     YGSIELCSVLPTQTL
Sb028146_Sorbi1 --SREV---------
                  * *:
BoxShade v3.31 C (beta, 970507) Output
AT5G25190.1     - - - - - - - - - - - - - - - - - - - - - - - M A R P Q Q R F R G V R Q R H W G S W V S - - - - - E I R H P L - - - - L
Sb028146_Sorbi1    L A A N L H G E V G V Q Q L L D H L L H V L L L Q E P A A P L R A R R W R R G G G G G S G R G G C S R R L P L P L R G L
 
AT5G25190.1     K T R - - - - I W L G T F E T A E D - - - - - - - - - - - - - - - - - A A R A Y - - D E A A R L M C G P R - - - - - - -
Sb028146_Sorbi1    H G R Q V E P V Q L L D E R R G E E R R G G G G G G R V G G V G G E V G A R A W P A H D P S R L V V G A R R V L R R L E
 
AT5G25190.1     - - - - - - - - - - - - A R T N F P Y N P N A I P T S S S K L L S A T L T A K L H K C Y M A S L Q M T K Q T Q T Q T Q T
Sb028146_Sorbi1    G A Q P Y P R L Q E R V A D L G D P G A P V A L P H A A V P L L R P G - - - - - H R R R S S S T A A V P L P S R S T F P
 
AT5G25190.1     Q T A R S Q S A D S D G V T A N E S H L N R G V T E T T E I K W E D G N A N M Q Q N F R P L E E D H I E Q M I E E L L H
Sb028146_Sorbi1    L S V R R R S P - - - A L V R S G S C C A R G E E E I A - - - - - - - - A E V Q Q - - - - - - - - - - - - - - - - - - -
 
AT5G25190.1     Y G S I E L C S V L P T Q T L
Sb028146_Sorbi1    - - S R E V - - - - - - - - -
 
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