fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009092 not found in 193aa AT5G25190.1 1st_1st 0.625874125 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25190.1     MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
gm009092_Glyma0 MARSQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRAR
                ***.***:******************:*****************************.***

AT5G25190.1     TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT
gm009092_Glyma0 TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQMTRPS---SQAEPQRVASPNVITSS
                *********  :***************:*********: :   :*::. *  *.:    :

AT5G25190.1     ANESHLNRGVTET--------TEIKWEDGN--------ANMQQNFRPLEEDHIEQMIEEL
gm009092_Glyma0 ASNFSMKSNETETLLLPQKRQEEEQEAEGNWVFKKVKVENAQQ-FKPLEEDHIEQMIEEL
                *.:  :: . ***         * :  :**         * ** *:**************

AT5G25190.1     LHYGSIELCSVLPTQTL
gm009092_Glyma0 LHYGSIELCSVIPPQAL
                ***********:*.*:*
BoxShade v3.31 C (beta, 970507) Output
AT5G25190.1     M A R P Q Q R F R G V R Q R H W G S W V S E I R H P L L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G P R A R
gm009092_Glyma0    M A R S Q Q R Y R G V R Q R H W G S W V S E I R H P I L K T R I W L G T F E T A E D A A R A Y D E A A R L M C G T R A R
 
AT5G25190.1     T N F P Y N P N A I P T S S S K L L S A T L T A K L H K C Y M A S L Q M T K Q T Q T Q T Q T Q T A R S Q S A D S D G V T
gm009092_Glyma0    T N F P Y N P N A S Q S S S S K L L S A T L T A K L H R C Y M A S L Q M T R P S - - - S Q A E P Q R V A S P N V I T S S
 
AT5G25190.1     A N E S H L N R G V T E T - - - - - - - - T E I K W E D G N - - - - - - - - A N M Q Q N F R P L E E D H I E Q M I E E L
gm009092_Glyma0    A S N F S M K S N E T E T L L L P Q K R Q E E E Q E A E G N W V F K K V K V E N A Q Q - F K P L E E D H I E Q M I E E L
 
AT5G25190.1     L H Y G S I E L C S V L P T Q T L
gm009092_Glyma0    L H Y G S I E L C S V I P P Q A L
 
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