fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25390.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006902 not found in 205aa AT1G15360.1 1st_not 0.512953367 II
Sb009863 not found in 204aa AT1G15360.1 1st_not 0.510362694 II
Gm009134 not found in 173aa AT5G11190.1 1st_not 0.598445595 II
Pt008236 not found in 178aa AT5G11190.1 1st_not 0.575129533 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G25390.2     MVHS-KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAK
pt008236_POPTR_ MVQS-KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAK
Sb009863_Sorbi1 MVQP-KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
gm009134_Glyma0 MVQA-KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAK
Os006902_Os02t0 MVQPKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                **:. *********:**********************:*** ******:**:**.*:.**

AT5G25390.2     TNFPVIKSN-----GSNSLE-----INSALRSPKS--LSELLNAKLRKNC-KDQTPYLTC
pt008236_POPTR_ TNFPTS---------HLDQDTNLGKDNNSPLPAKA--LAELLNSKLRKCCGKDPSPSLTC
Sb009863_Sorbi1 TNFPVQRSSTGEPTPAAGRD---AHSNAGSGSSTA-NLSQILSAKLRKCC-KAPSPSLTC
gm009134_Glyma0 TNFPTSKNQ-----AEADHD-----NNNTFLSPKA--LSELLSTKLRKYC-KDPAPSLTC
Os006902_Os02t0 TNFPVQRNSTGDLATAADQD---ARSNGGSRNSSAGNLSQILSAKLRKCC-KAPSPSLTC
                ****.            . :      *     ..:  *:::*.:**** * *  :* ***

AT5G25390.2     LRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDK---VNARPGGDIETNKMKVRNEDVQE
pt008236_POPTR_ LRLDNDNSHIGVWQKKAGSRSSSNWVMKVELGNYNKKTESSPTVEIEPEN------GTEE
Sb009863_Sorbi1 LRLDPEKSHIGVWQKRAGARADSNWVMTVELNKGAASTDAASQSTSATTAPPAT--PMDD
gm009134_Glyma0 LRLDADNSHIGVWQKGAGPHSGSNWVMRVELGKKQIITEVEVEVEVEEE---------EE
Os006902_Os02t0 LRLDPEKSHIGVWQKRAGARADSNWVMTVELNKEVEPTEPAAQPTSTATASQVT---MDD
                **** :.******** **.::..***  ***..    .:                   ::

AT5G25390.2     DDQMAMQMIEELLNWTCPGSGSIAQV------
pt008236_POPTR_ EDRIAMQMIEELLNRN----------------
Sb009863_Sorbi1 EERIALQMIEELLSSSSPASPSHGDDQGRFII
gm009134_Glyma0 EDRVALQMIEELLNWN----------------
Os006902_Os02t0 EEKIALQMIEELLSRSSPASPSHGEGEGSFVI
                ::::*:*******. .
BoxShade v3.31 C (beta, 970507) Output
AT5G25390.2     M V H S - K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F D T A E T A A R A Y D Q A A V L M N G Q S A K
pt008236_POPTR_    M V Q S - K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K
Sb009863_Sorbi1    M V Q P - K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
gm009134_Glyma0    M V Q A - K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K
Os006902_Os02t0    M V Q P K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT5G25390.2     T N F P V I K S N - - - - - G S N S L E - - - - - I N S A L R S P K S - - L S E L L N A K L R K N C - K D Q T P Y L T C
pt008236_POPTR_    T N F P T S - - - - - - - - - H L D Q D T N L G K D N N S P L P A K A - - L A E L L N S K L R K C C G K D P S P S L T C
Sb009863_Sorbi1    T N F P V Q R S S T G E P T P A A G R D - - - A H S N A G S G S S T A - N L S Q I L S A K L R K C C - K A P S P S L T C
gm009134_Glyma0    T N F P T S K N Q - - - - - A E A D H D - - - - - N N N T F L S P K A - - L S E L L S T K L R K Y C - K D P A P S L T C
Os006902_Os02t0    T N F P V Q R N S T G D L A T A A D Q D - - - A R S N G G S R N S S A G N L S Q I L S A K L R K C C - K A P S P S L T C
 
AT5G25390.2     L R L D N D S S H I G V W Q K R A G S K T S P N W V K L V E L G D K - - - V N A R P G G D I E T N K M K V R N E D V Q E
pt008236_POPTR_    L R L D N D N S H I G V W Q K K A G S R S S S N W V M K V E L G N Y N K K T E S S P T V E I E P E N - - - - - - G T E E
Sb009863_Sorbi1    L R L D P E K S H I G V W Q K R A G A R A D S N W V M T V E L N K G A A S T D A A S Q S T S A T T A P P A T - - P M D D
gm009134_Glyma0    L R L D A D N S H I G V W Q K G A G P H S G S N W V M R V E L G K K Q I I T E V E V E V E V E E E - - - - - - - - - E E
Os006902_Os02t0    L R L D P E K S H I G V W Q K R A G A R A D S N W V M T V E L N K E V E P T E P A A Q P T S T A T A S Q V T - - - M D D
 
AT5G25390.2     D D Q M A M Q M I E E L L N W T C P G S G S I A Q V - - - - - -
pt008236_POPTR_    E D R I A M Q M I E E L L N R N - - - - - - - - - - - - - - - -
Sb009863_Sorbi1    E E R I A L Q M I E E L L S S S S P A S P S H G D D Q G R F I I
gm009134_Glyma0    E D R V A L Q M I E E L L N W N - - - - - - - - - - - - - - - -
Os006902_Os02t0    E E K I A L Q M I E E L L S R S S P A S P S H G E G E G S F V I
 
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