fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25390.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005519 not found in 208aa AT5G11190.1 not_not 0.546632124 III
Pt009469 not found in 206aa AT1G15360.1 not_not 0.523316062 III
Pt010625 not found in 179aa AT1G15360.1 not_not 0.505181347 III
Pt007094 not found in 208aa AT1G15360.1 not_not 0.497409326 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G25390.2     ----------------MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAAR
pt010625_POPTR_ ----------------MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFDTAEEAAR
pt009469_POPTR_ ----------------MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAR
pt005519_POPTR_ MILICSSVFLSFLSQIMVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAAR
pt007094_POPTR_ ----------------MVPSKKFRGVRQRRWGSWVSEIRHPLVKRRVWLGTFETAEEAAR
                                ** **********:************:*********:*** ***

AT5G25390.2     AYDQAAVLMNGQSAKTNFPVIKSNGSNSL--EINSA----LRS-PKSLSELLNAKLRKNC
pt010625_POPTR_ AYDEAAILMSGRNAKTNFPVVANQTRNGQNSPSSSS--------------ALSAKLRKYC
pt009469_POPTR_ AYDQAAILMSGRNAKTNFPI--PQTSN-EEDPKSSD-EASLPTPPNGLSEILHAKLRKCS
pt005519_POPTR_ AYDQAAILMNGQNAKTNFPASHLDQDTKLGKDNNSP----LPA--KALAELLYSKLRKCC
pt007094_POPTR_ AYDQAAILMSGRNAKTNFPM--PQTSN-EDDPKSSDHQPSLTTPPNGLSQILHAKLRKCS
                ***:**:**.*:.******    :  .      .*                * :**** .

AT5G25390.2     -KDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNA-------------
pt010625_POPTR_ -RSPYPSLTCLRLDAENCHIGVWQKRAGPRSVSNWIMTVELGKKDGR--QAPEQKILISD
pt009469_POPTR_ -KAPSPSMTCLRLDTENSLIGVWQKRAGERSDSNWVMRVQLGQR-ES--QVSESTLPLP-
pt005519_POPTR_ GKDPSPSLTCLRLDNDNSHIGVWQKKAGSCSSSNWVMRVELGNSNRKSTQVMEEL-----
pt007094_POPTR_ -KAPSPSMTCLRLDAENS-IGVWQKRAGQRSDSNWVMTVQLGKRDES--QVSESALPLPD
                 :   * :****** :.. ******:**  : .**:  *:**.                 

AT5G25390.2     ------RPGGDIE-TNKMKVRNE---DVQEDDQMAMQMIEELLNWTCP---------GSG
pt010625_POPTR_ TSDMAGQEGGSDD-------GP------DDEERVALQMIEELLNR---------------
pt009469_POPTR_ ------QSSGGVS-------EPELRAEMGEDERIALQMIEELLNRNCPSPSFGVQDHGDG
pt005519_POPTR_ ------RPSLSSESSSRVEIEPEI-NGTDEEDKIAMQMIDELLNCN--------------
pt007094_POPTR_ ------QSPGGIS-------GPEWREEMDKEERVALQMVEELLNRNCPSPPFGVQDHDDD
                      :   . .                .::::*:**::****                

AT5G25390.2     SIAQV
pt010625_POPTR_ -----
pt009469_POPTR_ SLFL-
pt005519_POPTR_ -----
pt007094_POPTR_ SFFL-
BoxShade v3.31 C (beta, 970507) Output
AT5G25390.2     - - - - - - - - - - - - - - - - M V H S K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F D T A E T A A R
pt010625_POPTR_    - - - - - - - - - - - - - - - - M V Q S K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F D T A E E A A R
pt009469_POPTR_    - - - - - - - - - - - - - - - - M V Q S K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R
pt005519_POPTR_    M I L I C S S V F L S F L S Q I M V Q S K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R
pt007094_POPTR_    - - - - - - - - - - - - - - - - M V P S K K F R G V R Q R R W G S W V S E I R H P L V K R R V W L G T F E T A E E A A R
 
AT5G25390.2     A Y D Q A A V L M N G Q S A K T N F P V I K S N G S N S L - - E I N S A - - - - L R S - P K S L S E L L N A K L R K N C
pt010625_POPTR_    A Y D E A A I L M S G R N A K T N F P V V A N Q T R N G Q N S P S S S S - - - - - - - - - - - - - - A L S A K L R K Y C
pt009469_POPTR_    A Y D Q A A I L M S G R N A K T N F P I - - P Q T S N - E E D P K S S D - E A S L P T P P N G L S E I L H A K L R K C S
pt005519_POPTR_    A Y D Q A A I L M N G Q N A K T N F P A S H L D Q D T K L G K D N N S P - - - - L P A - - K A L A E L L Y S K L R K C C
pt007094_POPTR_    A Y D Q A A I L M S G R N A K T N F P M - - P Q T S N - E D D P K S S D H Q P S L T T P P N G L S Q I L H A K L R K C S
 
AT5G25390.2     - K D Q T P Y L T C L R L D N D S S H I G V W Q K R A G S K T S P N W V K L V E L G D K V N A - - - - - - - - - - - - -
pt010625_POPTR_    - R S P Y P S L T C L R L D A E N C H I G V W Q K R A G P R S V S N W I M T V E L G K K D G R - - Q A P E Q K I L I S D
pt009469_POPTR_    - K A P S P S M T C L R L D T E N S L I G V W Q K R A G E R S D S N W V M R V Q L G Q R - E S - - Q V S E S T L P L P -
pt005519_POPTR_    G K D P S P S L T C L R L D N D N S H I G V W Q K K A G S C S S S N W V M R V E L G N S N R K S T Q V M E E L - - - - -
pt007094_POPTR_    - K A P S P S M T C L R L D A E N S - I G V W Q K R A G Q R S D S N W V M T V Q L G K R D E S - - Q V S E S A L P L P D
 
AT5G25390.2     - - - - - - R P G G D I E - T N K M K V R N E - - - D V Q E D D Q M A M Q M I E E L L N W T C P - - - - - - - - - G S G
pt010625_POPTR_    T S D M A G Q E G G S D D - - - - - - - G P - - - - - - D D E E R V A L Q M I E E L L N R - - - - - - - - - - - - - - -
pt009469_POPTR_    - - - - - - Q S S G G V S - - - - - - - E P E L R A E M G E D E R I A L Q M I E E L L N R N C P S P S F G V Q D H G D G
pt005519_POPTR_    - - - - - - R P S L S S E S S S R V E I E P E I - N G T D E E D K I A M Q M I D E L L N C N - - - - - - - - - - - - - -
pt007094_POPTR_    - - - - - - Q S P G G I S - - - - - - - G P E W R E E M D K E E R V A L Q M V E E L L N R N C P S P P F G V Q D H D D D
 
AT5G25390.2     S I A Q V
pt010625_POPTR_    - - - - -
pt009469_POPTR_    S L F L -
pt005519_POPTR_    - - - - -
pt007094_POPTR_    S F F L -
 
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