fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25390.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006902 not found in 205aa AT1G15360.1 1st_not 0.512953367 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25390.2     MVH-SKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAK
Os006902_Os02t0 MVQPKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                **: .*********:**********************:*** ******:*****.*:.**

AT5G25390.2     TNFPV---------------IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYL
Os006902_Os02t0 TNFPVQRNSTGDLATAADQDARSNGGSR---NS---SAGNLSQILSAKLRKCCKAPSPSL
                *****                :***..    **   *. .**::*.***** **  :* *

AT5G25390.2     TCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQED
Os006902_Os02t0 TCLRLDPEKSHIGVWQKRAGARADSNWVMTVELNKEVEPTEPAAQPTSTATASQVTMDDE
                ****** :.***********:::..***  ***..:*:.   .   *.. .. :  ::::

AT5G25390.2     DQMAMQMIEELLNWTCPGSGSIAQV------
Os006902_Os02t0 EKIALQMIEELLSRSSPASPSHGEGEGSFVI
                :::*:*******. :.*.* * .:
BoxShade v3.31 C (beta, 970507) Output
AT5G25390.2     M V H - S K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F D T A E T A A R A Y D Q A A V L M N G Q S A K
Os006902_Os02t0    M V Q P K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT5G25390.2     T N F P V - - - - - - - - - - - - - - - I K S N G S N S L E I N S A L R S P K S L S E L L N A K L R K N C K D Q T P Y L
Os006902_Os02t0    T N F P V Q R N S T G D L A T A A D Q D A R S N G G S R - - - N S - - - S A G N L S Q I L S A K L R K C C K A P S P S L
 
AT5G25390.2     T C L R L D N D S S H I G V W Q K R A G S K T S P N W V K L V E L G D K V N A R P G G D I E T N K M K V R N E D V Q E D
Os006902_Os02t0    T C L R L D P E K S H I G V W Q K R A G A R A D S N W V M T V E L N K E V E P T E P A A Q P T S T A T A S Q V T M D D E
 
AT5G25390.2     D Q M A M Q M I E E L L N W T C P G S G S I A Q V - - - - - -
Os006902_Os02t0    E K I A L Q M I E E L L S R S S P A S P S H G E G E G S F V I
 
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