fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25390.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os025517 not found in 243aa AT1G15360.1 not_not 0.476683937 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25390.2     MVHS-KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAK
Os025517_Os06t0 MGQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAK
                * :* *********:**********************:*** ******:**:**.*:.**

AT5G25390.2     TNFPVIKS-------------------NGSNSLEINSALRSPKSLSELLNAKLRKNCKDQ
Os025517_Os06t0 TNFPVARNATGELTPAAAVAGRDGRVGGGSGSSSSMTANGGGNSLSQILSAKLRKCCKTP
                ***** :.                   .**.* .  :*  . :***::*.***** **  

AT5G25390.2     TPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNED
Os025517_Os06t0 SPSLTCLRLDPEKSHIGVWQKRAGARADSSWVMTVEL-NKDTAVSSAATVAAATAVSSSD
                :* ******* :.***********:::...**  *** :* .* ...   :    * ..*

AT5G25390.2     --------------------------VQEDDQMAMQMIEELLNWTCPGS----------G
Os025517_Os06t0 QPTPSDSTVTTTSTSTTGSPSPPPPAMDDEERIALQMIEELLGRSGPGSPSHGLLHGGEG
                                          :::::::*:*******. : ***          *

AT5G25390.2     SIAQV
Os025517_Os06t0 SLVI-
                *:.
BoxShade v3.31 C (beta, 970507) Output
AT5G25390.2     M V H S - K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F D T A E T A A R A Y D Q A A V L M N G Q S A K
Os025517_Os06t0    M G Q S K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A I L M S G R N A K
 
AT5G25390.2     T N F P V I K S - - - - - - - - - - - - - - - - - - - N G S N S L E I N S A L R S P K S L S E L L N A K L R K N C K D Q
Os025517_Os06t0    T N F P V A R N A T G E L T P A A A V A G R D G R V G G G S G S S S S M T A N G G G N S L S Q I L S A K L R K C C K T P
 
AT5G25390.2     T P Y L T C L R L D N D S S H I G V W Q K R A G S K T S P N W V K L V E L G D K V N A R P G G D I E T N K M K V R N E D
Os025517_Os06t0    S P S L T C L R L D P E K S H I G V W Q K R A G A R A D S S W V M T V E L - N K D T A V S S A A T V A A A T A V S S S D
 
AT5G25390.2     - - - - - - - - - - - - - - - - - - - - - - - - - - V Q E D D Q M A M Q M I E E L L N W T C P G S - - - - - - - - - - G
Os025517_Os06t0    Q P T P S D S T V T T T S T S T T G S P S P P P P A M D D E E R I A L Q M I E E L L G R S G P G S P S H G L L H G G E G
 
AT5G25390.2     S I A Q V
Os025517_Os06t0    S L V I -
 
0