fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25390.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009863 not found in 204aa AT1G15360.1 1st_not 0.510362694 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25390.2     MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT
Sb009863_Sorbi1 MVQPKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAKT
                **:.*********:**********************:*** ******:*****.*:.***

AT5G25390.2     NFPVIKSN--------GSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDND
Sb009863_Sorbi1 NFPVQRSSTGEPTPAAGRDAHSNAGSGSSTANLSQILSAKLRKCCKAPSPSLTCLRLDPE
                **** :*.        * :: .  .:  *. .**::*.***** **  :* ******* :

AT5G25390.2     SSHIGVWQKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQEDDQ-MAMQM
Sb009863_Sorbi1 KSHIGVWQKRAGARADSNWVMTVELNKGAASTDAASQSTSATTAPPATPMDDEERIALQM
                .***********:::..***  ***.. . :  ... .*.  ..      :*:: :*:**

AT5G25390.2     IEELLNWTCPGSGSIAQV------
Sb009863_Sorbi1 IEELLSSSSPASPSHGDDQGRFII
                *****. :.*.* * .:
BoxShade v3.31 C (beta, 970507) Output
AT5G25390.2     M V H S K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F D T A E T A A R A Y D Q A A V L M N G Q S A K T
Sb009863_Sorbi1    M V Q P K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K T
 
AT5G25390.2     N F P V I K S N - - - - - - - - G S N S L E I N S A L R S P K S L S E L L N A K L R K N C K D Q T P Y L T C L R L D N D
Sb009863_Sorbi1    N F P V Q R S S T G E P T P A A G R D A H S N A G S G S S T A N L S Q I L S A K L R K C C K A P S P S L T C L R L D P E
 
AT5G25390.2     S S H I G V W Q K R A G S K T S P N W V K L V E L G D K V N A R P G G D I E T N K M K V R N E D V Q E D D Q - M A M Q M
Sb009863_Sorbi1    K S H I G V W Q K R A G A R A D S N W V M T V E L N K G A A S T D A A S Q S T S A T T A P P A T P M D D E E R I A L Q M
 
AT5G25390.2     I E E L L N W T C P G S G S I A Q V - - - - - -
Sb009863_Sorbi1    I E E L L S S S S P A S P S H G D D Q G R F I I
 
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