fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25390.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003993 not found in 235aa AT1G15360.1 not_not 0.463730569 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25390.2     MVHS-KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAK
Sb003993_Sorbi1 MVQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                **:* *********:**********************:*** ******:*****.*:.**

AT5G25390.2     TNFPVIKS---------------NGSNSLEINSALRSP----KSLSELLNAKLRKNCKDQ
Sb003993_Sorbi1 TNFPVPRTATGELAPVPAARDARGGGGS---SSAAAAPGGGTSNLSQILSAKLRKCCKTP
                ***** ::               .*..*   .**  :*    ..**::*.***** **  

AT5G25390.2     TPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVEL-----------GDKVNARPGGDI
Sb003993_Sorbi1 SPSLTCLRLDPEKSHIGVWQKRAGARADSSWVMTVQLNKDVPPPASSSGEEPVPSDGGAA
                :* ******* :.***********:::...**  *:*           *::  .  **  

AT5G25390.2     ETNKMKVRNED-------------VQEDDQMAMQMIEELLNWTCP------GSGSIAQV
Sb003993_Sorbi1 ATTPTSTSTSSTVTTTGSPPPAMMMDDEERIALQMIEELLGSSHSHGMFQGAAGSIVI-
                 *.  .. ...             :::::::*:*******. : .      .:***.
BoxShade v3.31 C (beta, 970507) Output
AT5G25390.2     M V H S - K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F D T A E T A A R A Y D Q A A V L M N G Q S A K
Sb003993_Sorbi1    M V Q S K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT5G25390.2     T N F P V I K S - - - - - - - - - - - - - - - N G S N S L E I N S A L R S P - - - - K S L S E L L N A K L R K N C K D Q
Sb003993_Sorbi1    T N F P V P R T A T G E L A P V P A A R D A R G G G G S - - - S S A A A A P G G G T S N L S Q I L S A K L R K C C K T P
 
AT5G25390.2     T P Y L T C L R L D N D S S H I G V W Q K R A G S K T S P N W V K L V E L - - - - - - - - - - - G D K V N A R P G G D I
Sb003993_Sorbi1    S P S L T C L R L D P E K S H I G V W Q K R A G A R A D S S W V M T V Q L N K D V P P P A S S S G E E P V P S D G G A A
 
AT5G25390.2     E T N K M K V R N E D - - - - - - - - - - - - - V Q E D D Q M A M Q M I E E L L N W T C P - - - - - - G S G S I A Q V
Sb003993_Sorbi1    A T T P T S T S T S S T V T T T G S P P P A M M M D D E E R I A L Q M I E E L L G S S H S H G M F Q G A A G S I V I -
 
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