fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25390.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009863 not found in 204aa AT1G15360.1 1st_not 0.510362694 II
Sb003993 not found in 235aa AT1G15360.1 not_not 0.463730569 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G25390.2     MVHS-KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAK
Sb009863_Sorbi1 MVQP-KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
Sb003993_Sorbi1 MVQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                **:. *********:**********************:*** ******:*****.*:.**

AT5G25390.2     TNFPVIKSNGSNSLEINSALRSPKS-----------------LSELLNAKLRKNCKDQTP
Sb009863_Sorbi1 TNFPVQRSSTGE--PTPAAGRDAHSNAGS-------GSSTANLSQILSAKLRKCCKAPSP
Sb003993_Sorbi1 TNFPVPRTATGELAPVPAA-RDARGGGGSSSAAAAPGGGTSNLSQILSAKLRKCCKTPSP
                ***** ::  .:     :* *..:.                 **::*.***** **  :*

AT5G25390.2     YLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKV-------NARP----GGDIET
Sb009863_Sorbi1 SLTCLRLDPEKSHIGVWQKRAGARADSNWVMTVELNK------------------GAAST
Sb003993_Sorbi1 SLTCLRLDPEKSHIGVWQKRAGARADSSWVMTVQLNKDVPPPASSSGEEPVPSDGGAAAT
                 ******* :.***********:::...**  *:*..                  *   *

AT5G25390.2     NKMKVRNEDV-------------QEDDQMAMQMIEELLNWTCPGS----------GSIAQ
Sb009863_Sorbi1 DAASQSTSAT-----TAPPATPMDDEERIALQMIEELLSSSSPASPSHGDDQ---GRFII
Sb003993_Sorbi1 TPTSTSTSSTVTTTGSPPPAMMMDDEERIALQMIEELLGSSH----SHGMFQGAAGSIVI
                   .  .. .             ::::::*:*******. :              * :  

AT5G25390.2     V
Sb009863_Sorbi1 -
Sb003993_Sorbi1 -
BoxShade v3.31 C (beta, 970507) Output
AT5G25390.2     M V H S - K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F D T A E T A A R A Y D Q A A V L M N G Q S A K
Sb009863_Sorbi1    M V Q P - K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
Sb003993_Sorbi1    M V Q S K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT5G25390.2     T N F P V I K S N G S N S L E I N S A L R S P K S - - - - - - - - - - - - - - - - - L S E L L N A K L R K N C K D Q T P
Sb009863_Sorbi1    T N F P V Q R S S T G E - - P T P A A G R D A H S N A G S - - - - - - - G S S T A N L S Q I L S A K L R K C C K A P S P
Sb003993_Sorbi1    T N F P V P R T A T G E L A P V P A A - R D A R G G G G S S S A A A A P G G G T S N L S Q I L S A K L R K C C K T P S P
 
AT5G25390.2     Y L T C L R L D N D S S H I G V W Q K R A G S K T S P N W V K L V E L G D K V - - - - - - - N A R P - - - - G G D I E T
Sb009863_Sorbi1    S L T C L R L D P E K S H I G V W Q K R A G A R A D S N W V M T V E L N K - - - - - - - - - - - - - - - - - - G A A S T
Sb003993_Sorbi1    S L T C L R L D P E K S H I G V W Q K R A G A R A D S S W V M T V Q L N K D V P P P A S S S G E E P V P S D G G A A A T
 
AT5G25390.2     N K M K V R N E D V - - - - - - - - - - - - - Q E D D Q M A M Q M I E E L L N W T C P G S - - - - - - - - - - G S I A Q
Sb009863_Sorbi1    D A A S Q S T S A T - - - - - T A P P A T P M D D E E R I A L Q M I E E L L S S S S P A S P S H G D D Q - - - G R F I I
Sb003993_Sorbi1    T P T S T S T S S T V T T T G S P P P A M M M D D E E R I A L Q M I E E L L G S S H - - - - S H G M F Q G A A G S I V I
 
AT5G25390.2     V
Sb009863_Sorbi1    -
Sb003993_Sorbi1    -
 
0