fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25390.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009134 not found in 173aa AT5G11190.1 1st_not 0.598445595 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25390.2     MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT
gm009134_Glyma0 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
                **::********************************:***:*********:*****.***

AT5G25390.2     NFPVIKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQ
gm009134_Glyma0 NFPTSKNQAEADHDNNNTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQ
                ***. *.:.. . : *.:: ***:*****.:**** *** :* ******* *.*******

AT5G25390.2     KRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQEDDQMAMQMIEELLNWTC
gm009134_Glyma0 KGAGPHSGSNWVMRVELGKK------QIITEVEVEVEVEEEEEEDRVALQMIEELLNWN-
                * **.::..***  ****.*        *   :::*. *: :*:*::*:*********. 

AT5G25390.2     PGSGSIAQV
gm009134_Glyma0 ---------
BoxShade v3.31 C (beta, 970507) Output
AT5G25390.2     M V H S K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F D T A E T A A R A Y D Q A A V L M N G Q S A K T
gm009134_Glyma0    M V Q A K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
 
AT5G25390.2     N F P V I K S N G S N S L E I N S A L R S P K S L S E L L N A K L R K N C K D Q T P Y L T C L R L D N D S S H I G V W Q
gm009134_Glyma0    N F P T S K N Q A E A D H D N N N T F L S P K A L S E L L S T K L R K Y C K D P A P S L T C L R L D A D N S H I G V W Q
 
AT5G25390.2     K R A G S K T S P N W V K L V E L G D K V N A R P G G D I E T N K M K V R N E D V Q E D D Q M A M Q M I E E L L N W T C
gm009134_Glyma0    K G A G P H S G S N W V M R V E L G K K - - - - - - Q I I T E V E V E V E V E E E E E E D R V A L Q M I E E L L N W N -
 
AT5G25390.2     P G S G S I A Q V
gm009134_Glyma0    - - - - - - - - -
 
0