fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008221 not found in 250aa AT5G11590.1 1st_not 0.539267015 II
Pt029396 not found in 233aa AT5G25810.1 not_1st 0.489528795 II
Pt011904 not found in 231aa AT5G25810.1 not_1st 0.460732984 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G25810.1     ---------MIASES----TKSWEASAVRQ--ENEEEKKKPVK---------------DS
pt008221_POPTR_ MSDHHQQNSETESSS----TNSLSPASPSSPLSNSTQSKKPLKDQDFSPSKKIK-RIRDS
pt011904_POPTR_ ----MNEESTSSSNS----TCNSPPPSLATTITNKLNKQNPIQ-------QSSRSKVRDC
pt029396_POPTR_ ---MTKEESSNRSCSSICTTSSSSSSSFATTITNKLKKQNPVD-------QKSR-KARDC
                            * *    * .  ..:      *. :.::*:.               *.

AT5G25810.1     GKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILN
pt008221_POPTR_ NKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNPAILN
pt011904_POPTR_ SKHPVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDVAALCIKGDSAILN
pt029396_POPTR_ SKHAVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDVAALSIKGDSAILN
                .**.****** * *********:*************:*************.*** .****

AT5G25810.1     FPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLESLVS--S
pt008221_POPTR_ FPELANYLPRPASLAPRDVQAAAAKAAQMDQFDQKSETTTTTSPSSSSTSSLTSLVSLMD
pt011904_POPTR_ FPELADSLPRPVSVMPRDIQSAAAKAAAMVEFNSPSPSSSLSSSSVTVSE---------D
pt029396_POPTR_ FPELAASLPRPVSLMPRDIQAAAAKAAAMVDFNSSSPPSSLSSSSVSVSE---------D
                **:**  :*** *: ***:* ** *** *   :. * .:: : .*   :.         .

AT5G25810.1     SATGSEE-LGEIVELPSLGSSYDGLTQLGNEFIFSDSAD--LWPYPPQWSEG--------
pt008221_POPTR_ LSSQEEE-LCEIVELPSLETSYD---ELSNDFVYFDSID--EWMYPPPWMQSMENHCCGG
pt011904_POPTR_ VAESEEEYLSEIVELPNIEGSFDSPDQSRIEFMLFDSVDGHGWVYPPLDLCG--------
pt029396_POPTR_ VAESEEEYLSEIVELPNIEGSFDSPDQSQTEFMLFDSVD--RWVYPPLDLSG--------
                 :  .** * ******.:  *:*   :   :*:  ** *   * ***    .        

AT5G25810.1     ------DYQMIPASLSQDWDLQG-LYNY
pt008221_POPTR_ GGGCACDDFTLPNESTVLWDY-------
pt011904_POPTR_ ----EFSDQLLGLESLISSNLAGSVLN-
pt029396_POPTR_ ----EFCDQLLGLESLIPSNFGGSELN-
                          :  .     :
BoxShade v3.31 C (beta, 970507) Output
AT5G25810.1     - - - - - - - - - M I A S E S - - - - T K S W E A S A V R Q - - E N E E E K K K P V K - - - - - - - - - - - - - - - D S
pt008221_POPTR_    M S D H H Q Q N S E T E S S S - - - - T N S L S P A S P S S P L S N S T Q S K K P L K D Q D F S P S K K I K - R I R D S
pt011904_POPTR_    - - - - M N E E S T S S S N S - - - - T C N S P P P S L A T T I T N K L N K Q N P I Q - - - - - - - Q S S R S K V R D C
pt029396_POPTR_    - - - M T K E E S S N R S C S S I C T T S S S S S S S F A T T I T N K L K K Q N P V D - - - - - - - Q K S R - K A R D C
 
AT5G25810.1     G K H P V Y R G V R K R N W G K W V S E I R E P R K K S R I W L G T F P S P E M A A R A H D V A A L S I K G A S A I L N
pt008221_POPTR_    N K H P V Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G N P A I L N
pt011904_POPTR_    S K H P V Y R G V R R R A W G K W V S E I R Q P R K K S R I W L G T F P T P E M A A R A H D V A A L C I K G D S A I L N
pt029396_POPTR_    S K H A V Y R G V R R R A W G K W V S E I R Q P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G D S A I L N
 
AT5G25810.1     F P D L A G S F P R P S S L S P R D I Q V A A L K A A H M E T S Q S F S S S S S L T F S S S Q S S S S L E S L V S - - S
pt008221_POPTR_    F P E L A N Y L P R P A S L A P R D V Q A A A A K A A Q M D Q F D Q K S E T T T T T S P S S S S T S S L T S L V S L M D
pt011904_POPTR_    F P E L A D S L P R P V S V M P R D I Q S A A A K A A A M V E F N S P S P S S S L S S S S V T V S E - - - - - - - - - D
pt029396_POPTR_    F P E L A A S L P R P V S L M P R D I Q A A A A K A A A M V D F N S S S P P S S L S S S S V S V S E - - - - - - - - - D
 
AT5G25810.1     S A T G S E E - L G E I V E L P S L G S S Y D G L T Q L G N E F I F S D S A D - - L W P Y P P Q W S E G - - - - - - - -
pt008221_POPTR_    L S S Q E E E - L C E I V E L P S L E T S Y D - - - E L S N D F V Y F D S I D - - E W M Y P P P W M Q S M E N H C C G G
pt011904_POPTR_    V A E S E E E Y L S E I V E L P N I E G S F D S P D Q S R I E F M L F D S V D G H G W V Y P P L D L C G - - - - - - - -
pt029396_POPTR_    V A E S E E E Y L S E I V E L P N I E G S F D S P D Q S Q T E F M L F D S V D - - R W V Y P P L D L S G - - - - - - - -
 
AT5G25810.1     - - - - - - D Y Q M I P A S L S Q D W D L Q G - L Y N Y
pt008221_POPTR_    G G G C A C D D F T L P N E S T V L W D Y - - - - - - -
pt011904_POPTR_    - - - - E F S D Q L L G L E S L I S S N L A G S V L N -
pt029396_POPTR_    - - - - E F C D Q L L G L E S L I P S N F G G S E L N -
 
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