fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009314 not found in 188aa AT5G11590.1 1st_not 0.518324607 II
Gm020101 not found in 242aa AT5G25810.1 not_1st 0.468586387 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G25810.1     ---MIASESTKSWEAS-------AVRQENEEEKKKPVK---DSGKHPVYRGVRKRNWGKW
gm020101_Glyma0 MAELPSSEASSSSASSRKHSSSEAHLPAPDQKRPKQAR--DSSSKHPVFRGVRMRAWGKW
gm009314_Glyma0 ---MRVSTET-----------------EPETKKIKRIRGGGDSSKHPLYRGVRMRNWGKW
                   :  *  :                   : :: *  :   .*.***::**** * ****

AT5G25810.1     VSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPR
gm020101_Glyma0 VSEIREPRKKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNFPELAASLPRPDSNSPR
gm009314_Glyma0 VSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGPAAILNFPHLANSLPRPASLAPR
                **********.*******.:.************:*** :******.** *:*** * :**

AT5G25810.1     DIQVAALKAAHMETS------QSFSSSSSLTFSSSQSSSSLESLVSSS--ATGSEELGEI
gm020101_Glyma0 DVQAAAAKAAAMEVNDVPTTPSSSSSSASLSLSQSSSWSSLAVSSSSGDGPSTPEELGEI
gm009314_Glyma0 DVQAAAAKAAHMD------------------------PSSLSSLVSAMDLSSASDELSQI
                *:*.** *** *:                         ***    *:   .: .:**.:*

AT5G25810.1     VELPSLGSSYDGLTQLGNEFIFSDSADLWPYPPQWSEGDYQ----MIPASLSQDW----D
gm020101_Glyma0 VELPSLGTSFE-IPDPSGELVY---LDPWPYSQAWSHGIYDESEGYFIGDSETESMILCG
gm009314_Glyma0 IELPSLESTDDGSVDLKKEFVFVDSLDAWMYQPPFG------------FDTEQDT----G
                :***** :: :   :   *:::    * * *   :.             . . :     .

AT5G25810.1     LQGL-YNY
gm020101_Glyma0 FEGSLWQH
gm009314_Glyma0 FEGLMWNY
                ::*  :::
BoxShade v3.31 C (beta, 970507) Output
AT5G25810.1     - - - M I A S E S T K S W E A S - - - - - - - A V R Q E N E E E K K K P V K - - - D S G K H P V Y R G V R K R N W G K W
gm020101_Glyma0    M A E L P S S E A S S S S A S S R K H S S S E A H L P A P D Q K R P K Q A R - - D S S S K H P V F R G V R M R A W G K W
gm009314_Glyma0    - - - M R V S T E T - - - - - - - - - - - - - - - - - E P E T K K I K R I R G G G D S S K H P L Y R G V R M R N W G K W
 
AT5G25810.1     V S E I R E P R K K S R I W L G T F P S P E M A A R A H D V A A L S I K G A S A I L N F P D L A G S F P R P S S L S P R
gm020101_Glyma0    V S E I R E P R K K N R I W L G T F A T A E M A A R A H D V A A L A I K G N S A I L N F P E L A A S L P R P D S N S P R
gm009314_Glyma0    V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G P A A I L N F P H L A N S L P R P A S L A P R
 
AT5G25810.1     D I Q V A A L K A A H M E T S - - - - - - Q S F S S S S S L T F S S S Q S S S S L E S L V S S S - - A T G S E E L G E I
gm020101_Glyma0    D V Q A A A A K A A A M E V N D V P T T P S S S S S S A S L S L S Q S S S W S S L A V S S S S G D G P S T P E E L G E I
gm009314_Glyma0    D V Q A A A A K A A H M D - - - - - - - - - - - - - - - - - - - - - - - - P S S L S S L V S A M D L S S A S D E L S Q I
 
AT5G25810.1     V E L P S L G S S Y D G L T Q L G N E F I F S D S A D L W P Y P P Q W S E G D Y Q - - - - M I P A S L S Q D W - - - - D
gm020101_Glyma0    V E L P S L G T S F E - I P D P S G E L V Y - - - L D P W P Y S Q A W S H G I Y D E S E G Y F I G D S E T E S M I L C G
gm009314_Glyma0    I E L P S L E S T D D G S V D L K K E F V F V D S L D A W M Y Q P P F G - - - - - - - - - - - - F D T E Q D T - - - - G
 
AT5G25810.1     L Q G L - Y N Y
gm020101_Glyma0    F E G S L W Q H
gm009314_Glyma0    F E G L M W N Y
 
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